RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
PERM1-202ENST00000433179 ANKRD45Q5TZF3 282 aa16.22■□□□□ 0.19
PERM1-202ENST00000433179 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
PERM1-202ENST00000433179 MAP3K19Q56UN5 1328 aa16.2■□□□□ 0.18
PERM1-202ENST00000433179 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
PERM1-202ENST00000433179 MRPL50Q8N5N7 158 aaKnown RBP16.2■□□□□ 0.18
PERM1-202ENST00000433179 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
PERM1-202ENST00000433179 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
PERM1-202ENST00000433179 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
PERM1-202ENST00000433179 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
PERM1-202ENST00000433179 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
PERM1-202ENST00000433179 UQCRHLA0A096LP55 91 aa16.19■□□□□ 0.18
PERM1-202ENST00000433179 UQCRHP07919 91 aa16.19■□□□□ 0.18
PERM1-202ENST00000433179 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.19■□□□□ 0.18
PERM1-202ENST00000433179 SIRT2Q8IXJ6 389 aa16.19■□□□□ 0.18
PERM1-202ENST00000433179 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
PERM1-202ENST00000433179 SMAP1Q8IYB5 467 aaPredicted RBP16.18■□□□□ 0.18
PERM1-202ENST00000433179 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
PERM1-202ENST00000433179 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
PERM1-202ENST00000433179 IPO8O15397 1037 aaKnown RBP16.17■□□□□ 0.18
PERM1-202ENST00000433179 C16orf71Q8IYS4 520 aaPredicted RBP16.17■□□□□ 0.18
PERM1-202ENST00000433179 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
PERM1-202ENST00000433179 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
PERM1-202ENST00000433179 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
PERM1-202ENST00000433179 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
PERM1-202ENST00000433179 GAS2L3Q86XJ1 694 aa16.16■□□□□ 0.18
PERM1-202ENST00000433179 KIAA0232Q92628 1395 aa16.16■□□□□ 0.18
PERM1-202ENST00000433179 VGLL3A8MV65 326 aa16.16■□□□□ 0.18
PERM1-202ENST00000433179 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
PERM1-202ENST00000433179 GLI3P10071 1580 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 MSH6P52701 1360 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 ZSCAN30Q86W11 494 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 OFD1O75665 1012 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 GNAI1P63096 354 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 ESCO1Q5FWF5 840 aa16.15■□□□□ 0.18
PERM1-202ENST00000433179 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
PERM1-202ENST00000433179 SMC5Q8IY18 1101 aa16.14■□□□□ 0.17
PERM1-202ENST00000433179 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
PERM1-202ENST00000433179 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
PERM1-202ENST00000433179 RGS12O14924 1447 aa16.14■□□□□ 0.17
PERM1-202ENST00000433179 F6X3S4 739 aa16.14■□□□□ 0.17
PERM1-202ENST00000433179 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
PERM1-202ENST00000433179 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
PERM1-202ENST00000433179 OTUD7AQ8TE49 926 aaPredicted RBP16.14■□□□□ 0.17
PERM1-202ENST00000433179 PLCH1Q4KWH8 1693 aa16.13■□□□□ 0.17
PERM1-202ENST00000433179 MRC1P22897 1456 aa16.13■□□□□ 0.17
PERM1-202ENST00000433179 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
PERM1-202ENST00000433179 SMARCA5O60264 1052 aaPredicted RBP16.13■□□□□ 0.17
PERM1-202ENST00000433179 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
PERM1-202ENST00000433179 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
PERM1-202ENST00000433179 HOXC9P31274 260 aa16.12■□□□□ 0.17
PERM1-202ENST00000433179 SLC4A10Q6U841 1118 aa16.12■□□□□ 0.17
PERM1-202ENST00000433179 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
PERM1-202ENST00000433179 NLRP6P59044 892 aa16.12■□□□□ 0.17
PERM1-202ENST00000433179 NUCB1Q02818 461 aa16.12■□□□□ 0.17
PERM1-202ENST00000433179 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
PERM1-202ENST00000433179 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
PERM1-202ENST00000433179 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
PERM1-202ENST00000433179 G2E3Q7L622 706 aa16.11■□□□□ 0.17
PERM1-202ENST00000433179 NASPP49321 788 aaPredicted RBP16.11■□□□□ 0.17
PERM1-202ENST00000433179 C19orf44Q9H6X5 657 aa16.11■□□□□ 0.17
PERM1-202ENST00000433179 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
PERM1-202ENST00000433179 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
PERM1-202ENST00000433179 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
PERM1-202ENST00000433179 MTHFSDQ2M296 383 aaKnown RBP16.1■□□□□ 0.17
PERM1-202ENST00000433179 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
PERM1-202ENST00000433179 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
PERM1-202ENST00000433179 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
PERM1-202ENST00000433179 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
PERM1-202ENST00000433179 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
PERM1-202ENST00000433179 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
PERM1-202ENST00000433179 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
PERM1-202ENST00000433179 CPDO75976 1380 aa16.09■□□□□ 0.17
PERM1-202ENST00000433179 AMPHP49418 695 aa16.08■□□□□ 0.17
PERM1-202ENST00000433179 CBX1P83916 185 aa16.08■□□□□ 0.17
PERM1-202ENST00000433179 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.17
PERM1-202ENST00000433179 CD2BP2O95400 341 aaKnown RBP16.08■□□□□ 0.16
PERM1-202ENST00000433179 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
PERM1-202ENST00000433179 CCDC173Q0VFZ6 552 aa16.08■□□□□ 0.16
PERM1-202ENST00000433179 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
PERM1-202ENST00000433179 TSHZ3Q63HK5 1081 aa16.08■□□□□ 0.16
PERM1-202ENST00000433179 IP6K1Q92551 441 aa16.08■□□□□ 0.16
PERM1-202ENST00000433179 MEIS3Q99687 375 aa16.08■□□□□ 0.16
PERM1-202ENST00000433179 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
PERM1-202ENST00000433179 CHL1O00533 1208 aa16.07■□□□□ 0.16
PERM1-202ENST00000433179 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
PERM1-202ENST00000433179 GOLGA6L22H0YM25 854 aa16.07■□□□□ 0.16
PERM1-202ENST00000433179 TPRNQ4KMQ1 711 aa16.07■□□□□ 0.16
PERM1-202ENST00000433179 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
PERM1-202ENST00000433179 LTBP4Q8N2S1 1624 aa16.07■□□□□ 0.16
PERM1-202ENST00000433179 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
PERM1-202ENST00000433179 PSME1Q06323 249 aa16.06■□□□□ 0.16
PERM1-202ENST00000433179 EYA1Q99502 592 aa16.06■□□□□ 0.16
PERM1-202ENST00000433179 CDK11BP21127 795 aaKnown RBP16.06■□□□□ 0.16
PERM1-202ENST00000433179 DMTNQ08495 405 aa16.06■□□□□ 0.16
PERM1-202ENST00000433179 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
PERM1-202ENST00000433179 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms