RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 ABCC1P33527 1531 aa16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 HNRNPH2P55795 449 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ERO1AQ96HE7 468 aa16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 C16orf45Q96MC5 204 aaPredicted RBP16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 PTGS1P23219 599 aa16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 NEK4P51957 841 aa16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 FAM135BQ49AJ0 1406 aa16.68■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SSH2Q76I76 1423 aa16.68■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 TET3O43151 1660 aa16.68■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 BMS1Q14692 1282 aaKnown RBP16.67■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 NAA30Q147X3 362 aaPredicted RBP16.67■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SECISBP2LQ93073 1101 aaKnown RBP16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 C1orf115Q9H7X2 142 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 TXLNBQ8N3L3 684 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SPC24Q8NBT2 197 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 RASSF4Q9H2L5 321 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ATP10DQ9P241 1426 aa16.65■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 NOP2P46087 812 aaKnown RBP16.65■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
CSNK1A1P1-201ENST00000430593 H2AFXP16104 143 aaPredicted RBP16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ERBB3P21860 1342 aa16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 NYAP1Q6ZVC0 841 aa16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 KCND1Q9NSA2 647 aa16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ZNF446Q9NWS9 450 aa16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ZNF215Q9UL58 517 aaPredicted RBP16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ATP6V1DQ9Y5K8 247 aa16.64■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 PTPRCP08575 1304 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 MCCP23508 829 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 NEMFO60524 1076 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 CDC25BP30305 580 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 CCDC186Q7Z3E2 898 aa16.63■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ZSCAN22P10073 491 aaPredicted RBP16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 TEX35Q5T0J7 233 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 KIF2AO00139 706 aaPredicted RBP16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 TNNT3P45378 269 aaPredicted RBP16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 GIMAP6Q6P9H5 292 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ANKRD44Q8N8A2 993 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 BRMS1Q9HCU9 246 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 RSPH14Q9UHP6 348 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ADGRB1O14514 1584 aa16.61■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 LRMPQ12912 555 aa16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ST7Q9NRC1 585 aa16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 SLU7O95391 586 aaKnown RBP16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 PSEN1P49768 467 aa16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ZNF75DP51815 510 aa16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ELF2Q15723 593 aa16.6■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 ELP1O95163 1332 aa16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 KIF1BO60333 1816 aa16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 SOX12O15370 315 aa16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 DHX16O60231 1041 aaKnown RBP16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 VAMP4O75379 141 aa16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 CASQ1P31415 396 aa16.58■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 TPM4P67936 248 aa16.58■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 CERS3Q8IU89 383 aa16.58■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 HECW2Q9P2P5 1572 aa16.58■□□□□ 0.25
CSNK1A1P1-201ENST00000430593 BRD2P25440 801 aaKnown RBP16.58■□□□□ 0.24
CSNK1A1P1-201ENST00000430593 ICE2Q659A1 982 aa16.58■□□□□ 0.24
CSNK1A1P1-201ENST00000430593 TDRD7Q8NHU6 1098 aaKnown RBP16.58■□□□□ 0.24
CSNK1A1P1-201ENST00000430593 C16orf71Q8IYS4 520 aaPredicted RBP16.57■□□□□ 0.24
CSNK1A1P1-201ENST00000430593 L2HGDHQ9H9P8 463 aa16.57■□□□□ 0.24
CSNK1A1P1-201ENST00000430593 V9GYY5 206 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms