RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 POLKQ9UBT6 870 aa8.56□□□□□ -1.04
ATXN3-204ENST00000429774 ARHGEF12Q9NZN5 1544 aa8.56□□□□□ -1.04
ATXN3-204ENST00000429774 CCAR1Q8IX12 1150 aaKnown RBP8.56□□□□□ -1.04
ATXN3-204ENST00000429774 KDM5CP41229 1560 aa8.56□□□□□ -1.04
ATXN3-204ENST00000429774 SPHKAPQ2M3C7 1700 aa8.56□□□□□ -1.04
ATXN3-204ENST00000429774 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-204ENST00000429774 LRP2BPQ9P2M1 347 aa8.56□□□□□ -1.04
ATXN3-204ENST00000429774 MTHFSDQ2M296 383 aaKnown RBP8.56□□□□□ -1.04
ATXN3-204ENST00000429774 CARD14Q9BXL6 1004 aa8.56□□□□□ -1.04
ATXN3-204ENST00000429774 SLC3A2P08195 630 aaKnown RBP8.55□□□□□ -1.04
ATXN3-204ENST00000429774 SNRPA1P09661 255 aaKnown RBP8.55□□□□□ -1.04
ATXN3-204ENST00000429774 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 TFCP2L1Q9NZI6 479 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 HMGB2P26583 209 aaKnown RBP8.55□□□□□ -1.04
ATXN3-204ENST00000429774 CSPP1Q1MSJ5 1256 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 CHPF2Q9P2E5 772 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 CDC45O75419 566 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 CT47B1P0C2W7 299 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-204ENST00000429774 CEP126Q9P2H0 1117 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 ABCF2Q9UG63 623 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 MLH3Q9UHC1 1453 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 SIRT1Q96EB6 747 aa8.55□□□□□ -1.04
ATXN3-204ENST00000429774 A0A087WZG4 1122 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 HSP90AB3PQ58FF7 597 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 GCC1Q96CN9 775 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 DBF4Q9UBU7 674 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 MPHOSPH10O00566 681 aaKnown RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 IFIT5Q13325 482 aaKnown RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 CPLX2Q6PUV4 134 aaKnown RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 IP6K1Q92551 441 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 NKTRP30414 1462 aaKnown RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 ERVK-7P63135 1459 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 CAVIN4Q5BKX8 364 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 DNAAF4Q8WXU2 420 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 TET3O43151 1660 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 PTMSP20962 102 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 PDE3AQ14432 1141 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 NBPF5PQ86XG9 351 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 EXOC6BQ9Y2D4 811 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 FLT4P35916 1363 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 IDH1O75874 414 aaKnown RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 EYA1Q99502 592 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
ATXN3-204ENST00000429774 CWC25Q9NXE8 425 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-204ENST00000429774 ANKRD18BA2A2Z9 1011 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 KIAA2012Q0VF49 1180 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 NLRP1Q9C000 1473 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 PCDH11XQ9BZA7 1347 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 PCDH11YQ9BZA8 1340 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 ZNF335Q9H4Z2 1342 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-204ENST00000429774 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 ABCA9Q8IUA7 1624 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 METP08581 1390 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 PPP1R42Q7Z4L9 355 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 TMEM94Q12767 1356 aa8.53□□□□□ -1.04
ATXN3-204ENST00000429774 PES1O00541 588 aaKnown RBP8.53□□□□□ -1.04
ATXN3-204ENST00000429774 ABCC3O15438 1527 aa8.52□□□□□ -1.04
ATXN3-204ENST00000429774 CWC27Q6UX04 472 aaKnown RBP8.52□□□□□ -1.04
ATXN3-204ENST00000429774 DDX46Q7L014 1031 aaKnown RBP8.52□□□□□ -1.04
ATXN3-204ENST00000429774 MAP3K19Q56UN5 1328 aa8.52□□□□□ -1.04
ATXN3-204ENST00000429774 ABCC11Q96J66 1382 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 PLXNC1O60486 1568 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 HIP1O00291 1037 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.05
ATXN3-204ENST00000429774 FLIIQ13045 1269 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 PLEKHG1Q9ULL1 1385 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 TPM4P67936 248 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 PAXIP1Q6ZW49 1069 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-204ENST00000429774 TESK2Q96S53 571 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 RIMS1Q86UR5 1692 aaKnown RBP8.52□□□□□ -1.05
ATXN3-204ENST00000429774 CHD1LQ86WJ1 897 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 EDC4Q6P2E9 1401 aaKnown RBP8.52□□□□□ -1.05
ATXN3-204ENST00000429774 TDO2P48775 406 aa8.52□□□□□ -1.05
ATXN3-204ENST00000429774 SYAP1Q96A49 352 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-204ENST00000429774 PI4KAP2A4QPH2 592 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 VPS37CA5D8V6 355 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 STK3Q13188 491 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 AAMPQ13685 434 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 TPD52L1Q16890 204 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 PI4KAP1Q8N8J0 262 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 C22orf23Q9BZE7 217 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 CCDC8Q9H0W5 538 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 RTCBQ9Y3I0 505 aaKnown RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 CAMSAP1Q5T5Y3 1602 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 SART3Q15020 963 aaKnown RBP8.51□□□□□ -1.05
ATXN3-204ENST00000429774 ALDH1L2Q3SY69 923 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 CCDC34Q96HJ3 373 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 PSMA5P28066 241 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 ZSCAN25Q6NSZ9 544 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
ATXN3-204ENST00000429774 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms