RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 BTG4Q9NY30 223 aa11.03□□□□□ -0.64
GABPB1-205ENST00000429662 CCDC9Q9Y3X0 531 aaKnown RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
GABPB1-205ENST00000429662 DZIP1LQ8IYY4 767 aaKnown RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 LMO7Q8WWI1 1683 aa11.03□□□□□ -0.64
GABPB1-205ENST00000429662 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
GABPB1-205ENST00000429662 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.65
GABPB1-205ENST00000429662 IPO8O15397 1037 aaKnown RBP11.02□□□□□ -0.65
GABPB1-205ENST00000429662 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
GABPB1-205ENST00000429662 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.65
GABPB1-205ENST00000429662 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
GABPB1-205ENST00000429662 IFNL1Q8IU54 200 aa11.02□□□□□ -0.65
GABPB1-205ENST00000429662 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.65
GABPB1-205ENST00000429662 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
GABPB1-205ENST00000429662 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 USP19O94966 1318 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 APBA3O96018 575 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 TMPOP42166 694 aaKnown RBP11.01□□□□□ -0.65
GABPB1-205ENST00000429662 FTSJ3Q8IY81 847 aaKnown RBP11.01□□□□□ -0.65
GABPB1-205ENST00000429662 PLEKHF1Q96S99 279 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
GABPB1-205ENST00000429662 A0A0G2JS52 829 aa11□□□□□ -0.65
GABPB1-205ENST00000429662 CALD1Q05682 793 aaKnown RBP11□□□□□ -0.65
GABPB1-205ENST00000429662 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
GABPB1-205ENST00000429662 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
GABPB1-205ENST00000429662 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
GABPB1-205ENST00000429662 KIF16BQ96L93 1317 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 A0A1W2PP64 1363 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 EIF5BO60841 1220 aaKnown RBP10.99□□□□□ -0.65
GABPB1-205ENST00000429662 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
GABPB1-205ENST00000429662 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
GABPB1-205ENST00000429662 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 TBC1D32Q96NH3 1257 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 LRRC37A3O60309 1634 aa10.99□□□□□ -0.65
GABPB1-205ENST00000429662 PCNTO95613 3336 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 COL3A1P02461 1466 aaPredicted RBP10.98□□□□□ -0.65
GABPB1-205ENST00000429662 WNK3Q9BYP7 1800 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
GABPB1-205ENST00000429662 FCHSD2O94868 740 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 POGKQ9P215 609 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 DLC1Q96QB1 1528 aa10.98□□□□□ -0.65
GABPB1-205ENST00000429662 YTHDC2Q9H6S0 1430 aaKnown RBP10.98□□□□□ -0.65
GABPB1-205ENST00000429662 ANKRD26Q9UPS8 1709 aa10.97□□□□□ -0.65
GABPB1-205ENST00000429662 SEC24BO95487 1268 aa10.97□□□□□ -0.65
GABPB1-205ENST00000429662 RLBP1P12271 317 aa10.97□□□□□ -0.65
GABPB1-205ENST00000429662 ATF7IPQ6VMQ6 1270 aa10.97□□□□□ -0.65
GABPB1-205ENST00000429662 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
GABPB1-205ENST00000429662 PPP1R1BQ9UD71 204 aaPredicted RBP10.97□□□□□ -0.65
GABPB1-205ENST00000429662 U2SURPO15042 1029 aaKnown RBP10.96□□□□□ -0.65
GABPB1-205ENST00000429662 FYB1O15117 783 aa10.96□□□□□ -0.65
GABPB1-205ENST00000429662 IER5LQ5T953 404 aa10.96□□□□□ -0.65
GABPB1-205ENST00000429662 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
GABPB1-205ENST00000429662 SMC5Q8IY18 1101 aa10.95□□□□□ -0.66
GABPB1-205ENST00000429662 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
GABPB1-205ENST00000429662 SYT17Q9BSW7 474 aa10.95□□□□□ -0.66
GABPB1-205ENST00000429662 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
GABPB1-205ENST00000429662 PPIP5K1Q6PFW1 1433 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 ANKARQ7Z5J8 1434 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 RIPK4P57078 832 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 PRAM1Q96QH2 718 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
GABPB1-205ENST00000429662 ATP7BP35670 1465 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 SSH2Q76I76 1423 aa10.94□□□□□ -0.66
GABPB1-205ENST00000429662 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 FRAT2O75474 233 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-205ENST00000429662 TRIM27P14373 513 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 HAP1P54257 671 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-205ENST00000429662 L1TD1Q5T7N2 865 aaKnown RBP10.93□□□□□ -0.66
GABPB1-205ENST00000429662 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 SSH1Q8WYL5 1049 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 BCL2L13Q9BXK5 485 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
GABPB1-205ENST00000429662 PSME1Q06323 249 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 CDK19Q9BWU1 502 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 STK26Q9P289 416 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 NOB1Q9ULX3 412 aaKnown RBP10.92□□□□□ -0.66
GABPB1-205ENST00000429662 KIAA0232Q92628 1395 aa10.92□□□□□ -0.66
GABPB1-205ENST00000429662 ZBTB7AO95365 584 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 SIRT1Q96EB6 747 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 C22orf23Q9BZE7 217 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 ANTXR1Q9H6X2 564 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 ZBTB40Q9NUA8 1239 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 MINK1Q8N4C8 1332 aaPredicted RBP10.91□□□□□ -0.66
GABPB1-205ENST00000429662 PRR36Q9H6K5 1346 aa10.91□□□□□ -0.66
GABPB1-205ENST00000429662 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
GABPB1-205ENST00000429662 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms