RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
CDH3-202ENST00000429102 FOSBP53539 338 aa15.12■□□□□ 0.01
CDH3-202ENST00000429102 PPP1R9BQ96SB3 815 aa15.12■□□□□ 0.01
CDH3-202ENST00000429102 DEPDC5O75140 1603 aa15.12■□□□□ 0.01
CDH3-202ENST00000429102 LRSAM1Q6UWE0 723 aa15.12■□□□□ 0.01
CDH3-202ENST00000429102 SRGAP3O43295 1099 aa15.12■□□□□ 0.01
CDH3-202ENST00000429102 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
CDH3-202ENST00000429102 KIAA1210Q9ULL0 1709 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 OFD1O75665 1012 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 ZNF445P59923 1031 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
CDH3-202ENST00000429102 FAM173BQ6P4H8 233 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 CHMLP26374 656 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
CDH3-202ENST00000429102 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 PTCH1Q13635 1447 aa15.11■□□□□ 0.01
CDH3-202ENST00000429102 HDGFL1Q5TGJ6 251 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 PTPRMP28827 1452 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 NECAB1Q8N987 351 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 EYA1Q99502 592 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 TPM2P07951 284 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
CDH3-202ENST00000429102 AIMP1Q12904 312 aaKnown RBP15.09■□□□□ 0.01
CDH3-202ENST00000429102 CAMK4Q16566 473 aa15.09■□□□□ 0.01
CDH3-202ENST00000429102 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
CDH3-202ENST00000429102 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
CDH3-202ENST00000429102 CCT4P50991 539 aaKnown RBP15.09■□□□□ 0.01
CDH3-202ENST00000429102 ADGRB2O60241 1585 aa15.08■□□□□ 0
CDH3-202ENST00000429102 STK3Q13188 491 aa15.08■□□□□ 0
CDH3-202ENST00000429102 SIL1Q9H173 461 aa15.08■□□□□ 0
CDH3-202ENST00000429102 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
CDH3-202ENST00000429102 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0
CDH3-202ENST00000429102 TAF7Q15545 349 aaPredicted RBP15.07■□□□□ 0
CDH3-202ENST00000429102 FBXW7Q969H0 707 aa15.07■□□□□ 0
CDH3-202ENST00000429102 PA2G4Q9UQ80 394 aaKnown RBP15.07■□□□□ 0
CDH3-202ENST00000429102 ZKSCAN5Q9Y2L8 839 aa15.07■□□□□ 0
CDH3-202ENST00000429102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.07■□□□□ 0
CDH3-202ENST00000429102 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
CDH3-202ENST00000429102 CASTP20810 708 aaKnown RBP15.07■□□□□ 0
CDH3-202ENST00000429102 RASEFQ8IZ41 740 aa15.07■□□□□ 0
CDH3-202ENST00000429102 ZFYVE9O95405 1425 aa15.07■□□□□ 0
CDH3-202ENST00000429102 NOL7Q9UMY1 257 aaKnown RBP15.07■□□□□ 0
CDH3-202ENST00000429102 SMC3Q9UQE7 1217 aa15.07■□□□□ 0
CDH3-202ENST00000429102 SRCIN1Q9C0H9 1055 aa15.06■□□□□ 0
CDH3-202ENST00000429102 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
CDH3-202ENST00000429102 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
CDH3-202ENST00000429102 FRMPD1Q5SYB0 1578 aa15.06■□□□□ 0
CDH3-202ENST00000429102 ATP10DQ9P241 1426 aa15.06■□□□□ 0
CDH3-202ENST00000429102 PTPRCP08575 1304 aa15.06■□□□□ 0
CDH3-202ENST00000429102 KCNQ3O43525 872 aa15.06■□□□□ 0
CDH3-202ENST00000429102 GNAI3P08754 354 aa15.06■□□□□ 0
CDH3-202ENST00000429102 PRPF40BQ6NWY9 871 aaKnown RBP15.06■□□□□ 0
CDH3-202ENST00000429102 ABCA9Q8IUA7 1624 aa15.05■□□□□ 0
CDH3-202ENST00000429102 BRD1O95696 1058 aa15.05■□□□□ -0
CDH3-202ENST00000429102 MBD3O95983 291 aa15.05■□□□□ -0
CDH3-202ENST00000429102 CCDC39Q9UFE4 941 aa15.05■□□□□ -0
CDH3-202ENST00000429102 MED14O60244 1454 aa15.05■□□□□ -0
CDH3-202ENST00000429102 PPLO60437 1756 aa15.05■□□□□ -0
CDH3-202ENST00000429102 AK2P54819 239 aa15.05■□□□□ -0
CDH3-202ENST00000429102 KIAA2012Q0VF49 1180 aa15.05■□□□□ -0
CDH3-202ENST00000429102 JAKMIP1Q96N16 626 aaKnown RBP15.05■□□□□ -0
CDH3-202ENST00000429102 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
CDH3-202ENST00000429102 PI4KAP2A4QPH2 592 aa15.04■□□□□ -0
CDH3-202ENST00000429102 ADCY5O95622 1261 aa15.04■□□□□ -0
CDH3-202ENST00000429102 CEBPZQ03701 1054 aaKnown RBP15.04■□□□□ -0
CDH3-202ENST00000429102 DNM1Q05193 864 aaKnown RBP15.04■□□□□ -0
CDH3-202ENST00000429102 PI4KAP1Q8N8J0 262 aa15.04■□□□□ -0
CDH3-202ENST00000429102 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
CDH3-202ENST00000429102 USP44Q9H0E7 712 aa15.04■□□□□ -0
CDH3-202ENST00000429102 ABTB2Q8N961 1025 aa15.04■□□□□ -0
CDH3-202ENST00000429102 TFIP11Q9UBB9 837 aaKnown RBP15.04■□□□□ -0
CDH3-202ENST00000429102 ZC3H13Q5T200 1668 aaKnown RBP15.04■□□□□ -0
CDH3-202ENST00000429102 LARGE1O95461 756 aa15.04■□□□□ -0
CDH3-202ENST00000429102 ATP8B2P98198 1209 aa15.04■□□□□ -0
CDH3-202ENST00000429102 DRC7Q8IY82 874 aa15.04■□□□□ -0
CDH3-202ENST00000429102 CPS1P31327 1500 aa15.04■□□□□ -0
CDH3-202ENST00000429102 PIK3R4Q99570 1358 aa15.04■□□□□ -0
CDH3-202ENST00000429102 PDCL3Q9H2J4 239 aa15.03■□□□□ -0
CDH3-202ENST00000429102 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
CDH3-202ENST00000429102 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
CDH3-202ENST00000429102 CKAP2LQ8IYA6 745 aa15.03■□□□□ -0
CDH3-202ENST00000429102 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
CDH3-202ENST00000429102 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
CDH3-202ENST00000429102 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
CDH3-202ENST00000429102 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
CDH3-202ENST00000429102 MLH3Q9UHC1 1453 aa15.03■□□□□ -0
CDH3-202ENST00000429102 IGSF3O75054 1194 aa15.02■□□□□ -0
CDH3-202ENST00000429102 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
CDH3-202ENST00000429102 IL17REQ8NFR9 667 aa15.02■□□□□ -0
CDH3-202ENST00000429102 LGR6Q9HBX8 967 aa15.02■□□□□ -0
CDH3-202ENST00000429102 C9orf78Q9NZ63 289 aaPredicted RBP15.02■□□□□ -0
CDH3-202ENST00000429102 PIP4K2AP48426 406 aaPredicted RBP15.02□□□□□ -0.01
CDH3-202ENST00000429102 RHPN1Q8TCX5 695 aa15.02□□□□□ -0.01
CDH3-202ENST00000429102 CHPF2Q9P2E5 772 aa15.02□□□□□ -0.01
CDH3-202ENST00000429102 EDC4Q6P2E9 1401 aaKnown RBP15.02□□□□□ -0.01
CDH3-202ENST00000429102 GNAT3A8MTJ3 354 aa15.02□□□□□ -0.01
CDH3-202ENST00000429102 SYT1P21579 422 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms