RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
LRTOMT-206ENST00000427369 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
LRTOMT-206ENST00000427369 YTHDC2Q9H6S0 1430 aaKnown RBP15.03■□□□□ -0
LRTOMT-206ENST00000427369 TCHHQ07283 1943 aa15.03■□□□□ -0
LRTOMT-206ENST00000427369 KDM4AO75164 1064 aa15.02■□□□□ -0
LRTOMT-206ENST00000427369 OSBPL3Q9H4L5 887 aa15.02■□□□□ -0
LRTOMT-206ENST00000427369 HMMRO75330 724 aa15.02□□□□□ -0.01
LRTOMT-206ENST00000427369 MX1P20591 662 aa15.02□□□□□ -0.01
LRTOMT-206ENST00000427369 KIF20BQ96Q89 1820 aa15.02□□□□□ -0.01
LRTOMT-206ENST00000427369 RIOK3O14730 519 aaKnown RBP15.02□□□□□ -0.01
LRTOMT-206ENST00000427369 SLC4A10Q6U841 1118 aa15.02□□□□□ -0.01
LRTOMT-206ENST00000427369 IGSF3O75054 1194 aa15.01□□□□□ -0.01
LRTOMT-206ENST00000427369 PYCARDQ9ULZ3 195 aa15.01□□□□□ -0.01
LRTOMT-206ENST00000427369 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
LRTOMT-206ENST00000427369 U2AF2P26368 475 aaKnown RBP eCLIP15.01□□□□□ -0.01
LRTOMT-206ENST00000427369 SPC24Q8NBT2 197 aa15.01□□□□□ -0.01
LRTOMT-206ENST00000427369 PTPRMP28827 1452 aa15.01□□□□□ -0.01
LRTOMT-206ENST00000427369 DLG5Q8TDM6 1919 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 CHMLP26374 656 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 ANAPC15P60006 121 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
LRTOMT-206ENST00000427369 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 IDI1Q13907 227 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 KCNF1Q9H3M0 494 aa15□□□□□ -0.01
LRTOMT-206ENST00000427369 AP5Z1O43299 807 aa14.99□□□□□ -0.01
LRTOMT-206ENST00000427369 KIAA1524Q8TCG1 905 aa14.99□□□□□ -0.01
LRTOMT-206ENST00000427369 FIBPO43427 364 aa14.99□□□□□ -0.01
LRTOMT-206ENST00000427369 LETM1O95202 739 aaPredicted RBP14.99□□□□□ -0.01
LRTOMT-206ENST00000427369 LARP6Q9BRS8 491 aaKnown RBP14.99□□□□□ -0.01
LRTOMT-206ENST00000427369 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
LRTOMT-206ENST00000427369 F6X3S4 739 aa14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 KIF20AO95235 890 aa14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 RRS1Q15050 365 aaKnown RBP14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 RPAP1Q9BWH6 1393 aaPredicted RBP14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 MCM10Q7L590 875 aa14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 NME9Q86XW9 330 aa14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 TMEM87AQ8NBN3 555 aa14.98□□□□□ -0.01
LRTOMT-206ENST00000427369 PTPRCP08575 1304 aa14.97□□□□□ -0.01
LRTOMT-206ENST00000427369 UBE2HP62256 183 aa14.97□□□□□ -0.01
LRTOMT-206ENST00000427369 UNC5CLQ8IV45 518 aa14.97□□□□□ -0.01
LRTOMT-206ENST00000427369 DTNBO60941 627 aa14.97□□□□□ -0.01
LRTOMT-206ENST00000427369 ZSCAN22P10073 491 aaPredicted RBP14.97□□□□□ -0.01
LRTOMT-206ENST00000427369 SIGLEC1Q9BZZ2 1709 aa14.96□□□□□ -0.01
LRTOMT-206ENST00000427369 LRRCC1Q9C099 1032 aa14.96□□□□□ -0.01
LRTOMT-206ENST00000427369 IL25Q9H293 177 aa14.96□□□□□ -0.01
LRTOMT-206ENST00000427369 HAP1P54257 671 aaPredicted RBP14.96□□□□□ -0.02
LRTOMT-206ENST00000427369 CPSF1Q10570 1443 aaKnown RBP14.96□□□□□ -0.02
LRTOMT-206ENST00000427369 ANKRD7Q92527 254 aa14.96□□□□□ -0.02
LRTOMT-206ENST00000427369 G2E3Q7L622 706 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 SALL3Q9BXA9 1300 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 ASXL2Q76L83 1435 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 FUCA2Q9BTY2 467 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 MIS18AQ9NYP9 233 aa14.95□□□□□ -0.02
LRTOMT-206ENST00000427369 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 CLTCQ00610 1675 aaKnown RBP14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 PIK3C2BO00750 1634 aa14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 CHL1O00533 1208 aa14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 STX6O43752 255 aa14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 SYT1P21579 422 aa14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
LRTOMT-206ENST00000427369 GNAI2P04899 355 aa14.93□□□□□ -0.02
LRTOMT-206ENST00000427369 POGZQ7Z3K3 1410 aa14.93□□□□□ -0.02
LRTOMT-206ENST00000427369 KIAA0232Q92628 1395 aa14.93□□□□□ -0.02
LRTOMT-206ENST00000427369 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
LRTOMT-206ENST00000427369 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
LRTOMT-206ENST00000427369 F13A1P00488 732 aa14.93□□□□□ -0.02
LRTOMT-206ENST00000427369 PNMA6EA0A0J9YXQ4 647 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 GOLGA6L6A8MZA4 724 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 CTIFO43310 598 aaKnown RBP14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 PTGS1P23219 599 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 HSPA4P34932 840 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 TPM3P06753 285 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 SMC3Q9UQE7 1217 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 SSH2Q76I76 1423 aa14.92□□□□□ -0.02
LRTOMT-206ENST00000427369 AK2P54819 239 aa14.91□□□□□ -0.02
LRTOMT-206ENST00000427369 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
LRTOMT-206ENST00000427369 CCT4P50991 539 aaKnown RBP14.91□□□□□ -0.02
LRTOMT-206ENST00000427369 ZNF771Q7L3S4 317 aaPredicted RBP14.91□□□□□ -0.02
LRTOMT-206ENST00000427369 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
LRTOMT-206ENST00000427369 NCBP1Q09161 790 aaKnown RBP14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 COG3Q96JB2 828 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 IL1RAPL2Q9NP60 686 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 IL17RAQ96F46 866 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 ATP6V1DQ9Y5K8 247 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 CPA1P15085 419 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 C16orf45Q96MC5 204 aaPredicted RBP14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 BCL11BQ9C0K0 894 aaPredicted RBP14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
LRTOMT-206ENST00000427369 CCDC192P0DO97 292 aa14.89□□□□□ -0.03
LRTOMT-206ENST00000427369 FEZ1Q99689 392 aa14.89□□□□□ -0.03
LRTOMT-206ENST00000427369 NUTM1Q86Y26 1132 aa14.89□□□□□ -0.03
LRTOMT-206ENST00000427369 LIMCH1Q9UPQ0 1083 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms