RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 PRPF4BQ13523 1007 aaKnown RBP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 MRVI1Q9Y6F6 885 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 CETN2P41208 172 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 IMMTQ16891 758 aaKnown RBP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 FBF1Q8TES7 1133 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 SMG6Q86US8 1419 aaKnown RBP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 ZSCAN12O43309 604 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 USP25Q9UHP3 1055 aa13.21□□□□□ -0.29
POLR2J4-202ENST00000427076 NLRP6P59044 892 aa13.21□□□□□ -0.3
POLR2J4-202ENST00000427076 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.3
POLR2J4-202ENST00000427076 CTNNA2P26232 953 aa13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 NAP1L3Q99457 506 aaPredicted RBP13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 CPSF2Q9P2I0 782 aaKnown RBP13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 ERCC3P19447 782 aa13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 JPH4Q96JJ6 628 aa13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 MXRA7P84157 204 aa13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 GIGYF2Q6Y7W6 1299 aaKnown RBP13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 MCM4P33991 863 aa13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
POLR2J4-202ENST00000427076 FRMD3A2A2Y4 597 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 ANKRD18BA2A2Z9 1011 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 GNAI3P08754 354 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 NACAP1Q9BZK3 213 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 FAM114A2Q9NRY5 505 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 MIA2Q96PC5 1412 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 GNAI2P04899 355 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 CABP4P57796 275 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 CCDC6Q16204 474 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 GPRASP1Q5JY77 1395 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 MYL6BP14649 208 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 FKBP15Q5T1M5 1219 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 C6orf163Q5TEZ5 329 aa13.19□□□□□ -0.3
POLR2J4-202ENST00000427076 BCAR3O75815 825 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 ZWINTO95229 277 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 FERP16591 822 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 AKNAQ7Z591 1439 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 UBAC1Q9BSL1 405 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 SUDS3Q9H7L9 328 aaPredicted RBP13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 SPECC1LQ69YQ0 1117 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
POLR2J4-202ENST00000427076 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 POLD1P28340 1107 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 AACSQ86V21 672 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 MCM3P25205 808 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 SEPT6Q14141 434 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
POLR2J4-202ENST00000427076 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 SMIM23A6NLE4 172 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 HGSO14964 777 aaPredicted RBP13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 PHACTR2O75167 634 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 CDKL5O76039 1030 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
POLR2J4-202ENST00000427076 MCM6Q14566 821 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 TOM1L2Q6ZVM7 507 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 A0A1W2PRG0 241 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 TSG101Q99816 390 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 VPS18Q9P253 973 aa13.15□□□□□ -0.3
POLR2J4-202ENST00000427076 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms