RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PEAK1Q9H792 1746 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 SLIT1O75093 1534 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 HMMRO75330 724 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 HOXC9P31274 260 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 PKP1Q13835 747 aa15.98■□□□□ 0.15
COL12A1-205ENST00000425443 CIZ1Q9ULV3 898 aaPredicted RBP15.98■□□□□ 0.15
COL12A1-205ENST00000425443 FKBP5Q13451 457 aaPredicted RBP15.97■□□□□ 0.15
COL12A1-205ENST00000425443 IPO4Q8TEX9 1081 aaKnown RBP15.97■□□□□ 0.15
COL12A1-205ENST00000425443 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
COL12A1-205ENST00000425443 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
COL12A1-205ENST00000425443 CEP85Q6P2H3 762 aa15.97■□□□□ 0.15
COL12A1-205ENST00000425443 G2E3Q7L622 706 aa15.97■□□□□ 0.15
COL12A1-205ENST00000425443 USHBP1Q8N6Y0 703 aa15.97■□□□□ 0.15
COL12A1-205ENST00000425443 CRB1P82279 1406 aa15.96■□□□□ 0.15
COL12A1-205ENST00000425443 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
COL12A1-205ENST00000425443 TTC22Q5TAA0 569 aa15.96■□□□□ 0.15
COL12A1-205ENST00000425443 FER1L4A9Z1Z3 1794 aa15.96■□□□□ 0.15
COL12A1-205ENST00000425443 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.14
COL12A1-205ENST00000425443 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.14
COL12A1-205ENST00000425443 CLCN1P35523 988 aa15.95■□□□□ 0.14
COL12A1-205ENST00000425443 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
COL12A1-205ENST00000425443 PSME1Q06323 249 aa15.95■□□□□ 0.14
COL12A1-205ENST00000425443 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
COL12A1-205ENST00000425443 CASC1Q6TDU7 716 aa15.95■□□□□ 0.14
COL12A1-205ENST00000425443 GBP4Q96PP9 640 aa15.95■□□□□ 0.14
COL12A1-205ENST00000425443 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
COL12A1-205ENST00000425443 FOXD4L5Q5VV16 416 aaPredicted RBP15.94■□□□□ 0.14
COL12A1-205ENST00000425443 LMOD2Q6P5Q4 547 aa15.94■□□□□ 0.14
COL12A1-205ENST00000425443 FOXD4L4Q8WXT5 416 aaPredicted RBP15.94■□□□□ 0.14
COL12A1-205ENST00000425443 CHAMP1Q96JM3 812 aa15.94■□□□□ 0.14
COL12A1-205ENST00000425443 NCLP19338 710 aaKnown RBP15.94■□□□□ 0.14
COL12A1-205ENST00000425443 USP26Q9BXU7 913 aa15.94■□□□□ 0.14
COL12A1-205ENST00000425443 RTL1A6NKG5 1358 aa15.94■□□□□ 0.14
COL12A1-205ENST00000425443 SDSP20132 328 aa15.93■□□□□ 0.14
COL12A1-205ENST00000425443 NALCNQ8IZF0 1738 aa15.93■□□□□ 0.14
COL12A1-205ENST00000425443 VGLL3A8MV65 326 aa15.93■□□□□ 0.14
COL12A1-205ENST00000425443 BAG4O95429 457 aaKnown RBP15.93■□□□□ 0.14
COL12A1-205ENST00000425443 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
COL12A1-205ENST00000425443 ARID3AQ99856 593 aa15.93■□□□□ 0.14
COL12A1-205ENST00000425443 KDRP35968 1356 aa15.93■□□□□ 0.14
COL12A1-205ENST00000425443 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
COL12A1-205ENST00000425443 EXOC6BQ9Y2D4 811 aa15.92■□□□□ 0.14
COL12A1-205ENST00000425443 GNAI2P04899 355 aa15.92■□□□□ 0.14
COL12A1-205ENST00000425443 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
COL12A1-205ENST00000425443 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
COL12A1-205ENST00000425443 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
COL12A1-205ENST00000425443 FLIIQ13045 1269 aa15.92■□□□□ 0.14
COL12A1-205ENST00000425443 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
COL12A1-205ENST00000425443 ZGPATQ8N5A5 531 aaKnown RBP15.91■□□□□ 0.14
COL12A1-205ENST00000425443 MAP3K5Q99683 1374 aa15.9■□□□□ 0.14
COL12A1-205ENST00000425443 ESPNB1AK53 854 aa15.9■□□□□ 0.14
COL12A1-205ENST00000425443 EIF2S2P20042 333 aaKnown RBP15.9■□□□□ 0.14
COL12A1-205ENST00000425443 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
COL12A1-205ENST00000425443 SECISBP2LQ93073 1101 aaKnown RBP15.9■□□□□ 0.14
COL12A1-205ENST00000425443 FMN2Q9NZ56 1722 aa15.9■□□□□ 0.14
COL12A1-205ENST00000425443 RGPD1P0DJD0 1748 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 GNAI3P08754 354 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 HOMEZQ8IX15 550 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
COL12A1-205ENST00000425443 SETD1BQ9UPS6 1966 aaKnown RBP15.89■□□□□ 0.13
COL12A1-205ENST00000425443 HDGFL1Q5TGJ6 251 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 MCTP1Q6DN14 999 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 CLEC17AQ6ZS10 378 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
COL12A1-205ENST00000425443 CYP2E1P05181 493 aaPredicted RBP15.88■□□□□ 0.13
COL12A1-205ENST00000425443 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
COL12A1-205ENST00000425443 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
COL12A1-205ENST00000425443 RABEP1Q15276 862 aa15.88■□□□□ 0.13
COL12A1-205ENST00000425443 SKOR2Q2VWA4 1001 aaPredicted RBP15.88■□□□□ 0.13
COL12A1-205ENST00000425443 ZDHHC9Q9Y397 364 aa15.88■□□□□ 0.13
COL12A1-205ENST00000425443 DDX49Q9Y6V7 483 aaKnown RBP15.88■□□□□ 0.13
COL12A1-205ENST00000425443 FOXD4L6Q3SYB3 417 aaPredicted RBP15.86■□□□□ 0.13
COL12A1-205ENST00000425443 FOXD4L3Q6VB84 417 aaPredicted RBP15.86■□□□□ 0.13
COL12A1-205ENST00000425443 IP6K1Q92551 441 aa15.86■□□□□ 0.13
COL12A1-205ENST00000425443 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
COL12A1-205ENST00000425443 ISY1Q9ULR0 285 aaKnown RBP15.86■□□□□ 0.13
COL12A1-205ENST00000425443 TRIM6-TRIM34B2RNG4 842 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 TEFQ10587 303 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 KLHL40Q2TBA0 621 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 LMBRD1Q9NUN5 540 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 KCNH5Q8NCM2 988 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 NBPF6Q5VWK0 638 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 NBPF4Q96M43 638 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 LRRCC1Q9C099 1032 aa15.85■□□□□ 0.13
COL12A1-205ENST00000425443 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
COL12A1-205ENST00000425443 REC8O95072 547 aa15.84■□□□□ 0.13
COL12A1-205ENST00000425443 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
COL12A1-205ENST00000425443 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
COL12A1-205ENST00000425443 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
COL12A1-205ENST00000425443 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
COL12A1-205ENST00000425443 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
COL12A1-205ENST00000425443 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.12
COL12A1-205ENST00000425443 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
COL12A1-205ENST00000425443 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
COL12A1-205ENST00000425443 NSFL1CQ9UNZ2 370 aaKnown RBP15.83■□□□□ 0.12
COL12A1-205ENST00000425443 PDE1AP54750 535 aa15.83■□□□□ 0.12
COL12A1-205ENST00000425443 GPT2Q8TD30 523 aa15.83■□□□□ 0.12
COL12A1-205ENST00000425443 PHAXQ9H814 394 aaKnown RBP15.83■□□□□ 0.12
COL12A1-205ENST00000425443 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms