RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
LMO3-206ENST00000424192 ACSBG1Q96GR2 724 aa15.51■□□□□ 0.07
LMO3-206ENST00000424192 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
LMO3-206ENST00000424192 ERVV-2B6SEH9 535 aa15.5■□□□□ 0.07
LMO3-206ENST00000424192 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
LMO3-206ENST00000424192 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
LMO3-206ENST00000424192 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
LMO3-206ENST00000424192 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
LMO3-206ENST00000424192 ITGB4P16144 1822 aa15.49■□□□□ 0.07
LMO3-206ENST00000424192 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
LMO3-206ENST00000424192 KCNQ2O43526 872 aa15.48■□□□□ 0.07
LMO3-206ENST00000424192 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
LMO3-206ENST00000424192 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
LMO3-206ENST00000424192 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
LMO3-206ENST00000424192 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
LMO3-206ENST00000424192 RTF1Q92541 710 aaKnown RBP15.46■□□□□ 0.07
LMO3-206ENST00000424192 RUNDC1Q96C34 613 aa15.46■□□□□ 0.07
LMO3-206ENST00000424192 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
LMO3-206ENST00000424192 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
LMO3-206ENST00000424192 LY75O60449 1722 aa15.46■□□□□ 0.06
LMO3-206ENST00000424192 NUP188Q5SRE5 1749 aa15.46■□□□□ 0.06
LMO3-206ENST00000424192 CABP4P57796 275 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 EN1Q05925 392 aaPredicted RBP15.45■□□□□ 0.06
LMO3-206ENST00000424192 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 SLC27A3Q5K4L6 730 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
LMO3-206ENST00000424192 MPRIPQ6WCQ1 1025 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 PHACTR3Q96KR7 559 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 CEMIPQ8WUJ3 1361 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 PALLDQ8WX93 1383 aa15.45■□□□□ 0.06
LMO3-206ENST00000424192 KAT6BQ8WYB5 2073 aa15.44■□□□□ 0.06
LMO3-206ENST00000424192 PAPPAQ13219 1627 aa15.44■□□□□ 0.06
LMO3-206ENST00000424192 RNMTO43148 476 aaKnown RBP15.44■□□□□ 0.06
LMO3-206ENST00000424192 SLC52A2Q9HAB3 445 aa15.44■□□□□ 0.06
LMO3-206ENST00000424192 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
LMO3-206ENST00000424192 CCER2I3L3R5 266 aa15.43■□□□□ 0.06
LMO3-206ENST00000424192 TEFQ10587 303 aa15.43■□□□□ 0.06
LMO3-206ENST00000424192 PIGBQ92521 554 aa15.43■□□□□ 0.06
LMO3-206ENST00000424192 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
LMO3-206ENST00000424192 ZNF831Q5JPB2 1677 aa15.43■□□□□ 0.06
LMO3-206ENST00000424192 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
LMO3-206ENST00000424192 PTF1AQ7RTS3 328 aa15.42■□□□□ 0.06
LMO3-206ENST00000424192 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
LMO3-206ENST00000424192 CICQ96RK0 1608 aaPredicted RBP15.42■□□□□ 0.06
LMO3-206ENST00000424192 TXNRD1Q16881 649 aa15.41■□□□□ 0.06
LMO3-206ENST00000424192 PNISRQ8TF01 805 aaKnown RBP15.41■□□□□ 0.06
LMO3-206ENST00000424192 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
LMO3-206ENST00000424192 NBPF14Q5TI25 921 aa15.4■□□□□ 0.06
LMO3-206ENST00000424192 DLG5Q8TDM6 1919 aa15.4■□□□□ 0.06
LMO3-206ENST00000424192 CCNL1Q9UK58 526 aaPredicted RBP15.39■□□□□ 0.05
LMO3-206ENST00000424192 C5P01031 1676 aa15.38■□□□□ 0.05
LMO3-206ENST00000424192 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
LMO3-206ENST00000424192 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
LMO3-206ENST00000424192 CCDC146Q8IYE0 955 aa15.38■□□□□ 0.05
LMO3-206ENST00000424192 NFATC2IPQ8NCF5 419 aa15.38■□□□□ 0.05
LMO3-206ENST00000424192 LGR6Q9HBX8 967 aa15.38■□□□□ 0.05
LMO3-206ENST00000424192 UBR2Q8IWV8 1755 aa15.37■□□□□ 0.05
LMO3-206ENST00000424192 RIPK4P57078 832 aa15.37■□□□□ 0.05
LMO3-206ENST00000424192 TTC5Q8N0Z6 440 aa15.37■□□□□ 0.05
LMO3-206ENST00000424192 IL17REQ8NFR9 667 aa15.37■□□□□ 0.05
LMO3-206ENST00000424192 ATG3Q9NT62 314 aa15.37■□□□□ 0.05
LMO3-206ENST00000424192 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
LMO3-206ENST00000424192 SIK1P57059 783 aa15.36■□□□□ 0.05
LMO3-206ENST00000424192 CALD1Q05682 793 aaKnown RBP15.36■□□□□ 0.05
LMO3-206ENST00000424192 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
LMO3-206ENST00000424192 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
LMO3-206ENST00000424192 KCPQ6ZWJ8 1503 aa15.35■□□□□ 0.05
LMO3-206ENST00000424192 MCM10Q7L590 875 aa15.35■□□□□ 0.05
LMO3-206ENST00000424192 STK32BQ9NY57 414 aa15.35■□□□□ 0.05
LMO3-206ENST00000424192 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
LMO3-206ENST00000424192 BABAM1Q9NWV8 329 aa15.34■□□□□ 0.05
LMO3-206ENST00000424192 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.05
LMO3-206ENST00000424192 BTBD11A6QL63 1104 aa15.33■□□□□ 0.04
LMO3-206ENST00000424192 TAF7Q15545 349 aaPredicted RBP15.33■□□□□ 0.04
LMO3-206ENST00000424192 ZNF790Q6PG37 636 aa15.33■□□□□ 0.04
LMO3-206ENST00000424192 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
LMO3-206ENST00000424192 C4BP0C0L5 1744 aa15.33■□□□□ 0.04
LMO3-206ENST00000424192 COL5A3P25940 1745 aaPredicted RBP15.33■□□□□ 0.04
LMO3-206ENST00000424192 KDM3BQ7LBC6 1761 aa15.32■□□□□ 0.04
LMO3-206ENST00000424192 APAF1O14727 1248 aa15.32■□□□□ 0.04
LMO3-206ENST00000424192 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
LMO3-206ENST00000424192 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
LMO3-206ENST00000424192 TJP1Q07157 1748 aa15.31■□□□□ 0.04
LMO3-206ENST00000424192 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
LMO3-206ENST00000424192 CCDC27Q2M243 656 aa15.31■□□□□ 0.04
LMO3-206ENST00000424192 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
LMO3-206ENST00000424192 FMNL2Q96PY5 1086 aa15.31■□□□□ 0.04
LMO3-206ENST00000424192 RRP7AQ9Y3A4 280 aaKnown RBP15.31■□□□□ 0.04
LMO3-206ENST00000424192 PTCD1O75127 700 aaKnown RBP15.3■□□□□ 0.04
LMO3-206ENST00000424192 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
LMO3-206ENST00000424192 SLC15A2Q16348 729 aa15.3■□□□□ 0.04
LMO3-206ENST00000424192 AK7Q96M32 723 aa15.3■□□□□ 0.04
LMO3-206ENST00000424192 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
LMO3-206ENST00000424192 CNTNAP4Q9C0A0 1308 aa15.3■□□□□ 0.04
LMO3-206ENST00000424192 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
LMO3-206ENST00000424192 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
LMO3-206ENST00000424192 FLAD1Q8NFF5 587 aa15.29■□□□□ 0.04
LMO3-206ENST00000424192 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
LMO3-206ENST00000424192 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
LMO3-206ENST00000424192 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms