RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 SIL1Q9H173 461 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 KRT85P78386 507 aa13.07□□□□□ -0.32
FN1-207ENST00000421182 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
FN1-207ENST00000421182 RNF41Q9H4P4 317 aaPredicted RBP13.07□□□□□ -0.32
FN1-207ENST00000421182 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
FN1-207ENST00000421182 MKNK2Q9HBH9 465 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 FGFR1OPO95684 399 aaKnown RBP13.06□□□□□ -0.32
FN1-207ENST00000421182 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
FN1-207ENST00000421182 PPFIBP1Q86W92 1011 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 TRAF1Q13077 416 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
FN1-207ENST00000421182 SEPT7Q16181 437 aaKnown RBP13.06□□□□□ -0.32
FN1-207ENST00000421182 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 DEF6Q9H4E7 631 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 UGGT2Q9NYU1 1516 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
FN1-207ENST00000421182 CETN2P41208 172 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
FN1-207ENST00000421182 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
FN1-207ENST00000421182 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 A2MP01023 1474 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
FN1-207ENST00000421182 ZHX3Q9H4I2 956 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
FN1-207ENST00000421182 DHX29Q7Z478 1369 aaKnown RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 BAG3O95817 575 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 ZNF397Q8NF99 534 aaPredicted RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 NEBLO76041 1014 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 FMNL2Q96PY5 1086 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 GLRX3O76003 335 aaKnown RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 CCDC12Q8WUD4 166 aaPredicted RBP13.04□□□□□ -0.32
FN1-207ENST00000421182 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 ME1P48163 572 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 PTPRCP08575 1304 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
FN1-207ENST00000421182 ABCC10Q5T3U5 1492 aa13.03□□□□□ -0.32
FN1-207ENST00000421182 AMOTL2Q9Y2J4 779 aa13.03□□□□□ -0.32
FN1-207ENST00000421182 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
FN1-207ENST00000421182 GBP2P32456 591 aaPredicted RBP13.03□□□□□ -0.32
FN1-207ENST00000421182 LDHCP07864 332 aa13.03□□□□□ -0.32
FN1-207ENST00000421182 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
FN1-207ENST00000421182 MTERF4Q7Z6M4 381 aaKnown RBP13.03□□□□□ -0.32
FN1-207ENST00000421182 IDH1O75874 414 aaKnown RBP13.03□□□□□ -0.32
FN1-207ENST00000421182 NAPBQ9H115 298 aa13.03□□□□□ -0.32
FN1-207ENST00000421182 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.32
FN1-207ENST00000421182 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.32
FN1-207ENST00000421182 RFC4P35249 363 aa13.02□□□□□ -0.32
FN1-207ENST00000421182 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.32
FN1-207ENST00000421182 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.32
FN1-207ENST00000421182 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.32
FN1-207ENST00000421182 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.32
FN1-207ENST00000421182 KIF20AO95235 890 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
FN1-207ENST00000421182 GSTO1P78417 241 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
FN1-207ENST00000421182 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
FN1-207ENST00000421182 TANGO6Q9C0B7 1094 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
FN1-207ENST00000421182 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
FN1-207ENST00000421182 HSP90AA2PQ14568 343 aaPredicted RBP13.01□□□□□ -0.33
FN1-207ENST00000421182 SERPINC1P01008 464 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
FN1-207ENST00000421182 TSPY26PQ9H489 355 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 TTC21AQ8NDW8 1320 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 CTCFLQ8NI51 663 aaPredicted RBP13.01□□□□□ -0.33
FN1-207ENST00000421182 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
FN1-207ENST00000421182 UHRF1BP1Q6BDS2 1440 aa13□□□□□ -0.33
FN1-207ENST00000421182 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
FN1-207ENST00000421182 NEFHP12036 1026 aa13□□□□□ -0.33
FN1-207ENST00000421182 KIF5BP33176 963 aa13□□□□□ -0.33
FN1-207ENST00000421182 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
FN1-207ENST00000421182 SMTNL1A8MU46 457 aa13□□□□□ -0.33
FN1-207ENST00000421182 EZRP15311 586 aaKnown RBP13□□□□□ -0.33
FN1-207ENST00000421182 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
FN1-207ENST00000421182 CWC15Q9P013 229 aaKnown RBP13□□□□□ -0.33
FN1-207ENST00000421182 KRT28Q7Z3Y7 464 aa13□□□□□ -0.33
FN1-207ENST00000421182 FANCIQ9NVI1 1328 aa13□□□□□ -0.33
FN1-207ENST00000421182 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 TNMDQ9H2S6 317 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 B4DLN1 442 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms