RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 NFE2L2Q16236 605 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 ANKRD24Q8TF21 1146 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 LRRCC1Q9C099 1032 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 CEP170BQ9Y4F5 1589 aaPredicted RBP10.11□□□□□ -0.79
UBR4-206ENST00000419533 IGHMBP2P38935 993 aaKnown RBP10.11□□□□□ -0.79
UBR4-206ENST00000419533 SASS6Q6UVJ0 657 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 RXRBP28702 533 aa10.1□□□□□ -0.79
UBR4-206ENST00000419533 SETD1BQ9UPS6 1966 aaKnown RBP10.1□□□□□ -0.79
UBR4-206ENST00000419533 RBM5P52756 815 aaKnown RBP eCLIP10.1□□□□□ -0.79
UBR4-206ENST00000419533 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
UBR4-206ENST00000419533 UNC13BO14795 1591 aa10.1□□□□□ -0.79
UBR4-206ENST00000419533 SLC4A3P48751 1232 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 BTG4Q9NY30 223 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 ZPR1O75312 459 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 MCM2P49736 904 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 CDCA7LQ96GN5 454 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 BCL11BQ9C0K0 894 aaPredicted RBP10.09□□□□□ -0.79
UBR4-206ENST00000419533 SIL1Q9H173 461 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 ZFYVE9O95405 1425 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
UBR4-206ENST00000419533 ANKRD36BQ8N2N9 1353 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 MYOM2P54296 1465 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
UBR4-206ENST00000419533 GCP02774 474 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 ATF7IPQ6VMQ6 1270 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 FBXO41Q8TF61 875 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 METP08581 1390 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 OLFM4Q6UX06 510 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 KRI1Q8N9T8 703 aaKnown RBP10.08□□□□□ -0.8
UBR4-206ENST00000419533 CEP152O94986 1710 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 PDCP20941 246 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
UBR4-206ENST00000419533 ATP2B2Q01814 1243 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 SMARCC1Q92922 1105 aaPredicted RBP10.07□□□□□ -0.8
UBR4-206ENST00000419533 SYNMO15061 1565 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 TXLNAP40222 546 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 IL2RBP14784 551 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 EPS15P42566 896 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 NAT10Q9H0A0 1025 aaKnown RBP10.07□□□□□ -0.8
UBR4-206ENST00000419533 BAG6P46379 1132 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 QTRT2Q9H974 415 aaKnown RBP10.07□□□□□ -0.8
UBR4-206ENST00000419533 TMOD2Q9NZR1 351 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
UBR4-206ENST00000419533 RICTORQ6R327 1708 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 IFNL2Q8IZJ0 200 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 HSP90AB3PQ58FF7 597 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 AACSQ86V21 672 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 JCADQ9P266 1359 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 KIF13AQ9H1H9 1805 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
UBR4-206ENST00000419533 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
UBR4-206ENST00000419533 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
UBR4-206ENST00000419533 RAI14Q9P0K7 980 aa10.06□□□□□ -0.8
UBR4-206ENST00000419533 DISP3Q9P2K9 1392 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 CCDC69A6NI79 296 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 RABEP1Q15276 862 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 LARP1Q6PKG0 1096 aaKnown RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 ZNF396Q96N95 335 aaPredicted RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 CTNNA3Q9UI47 895 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 RNF17Q9BXT8 1623 aaKnown RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 FKBP4Q02790 459 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBR4-206ENST00000419533 TAF7Q15545 349 aaPredicted RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 ZSCAN29Q8IWY8 852 aaPredicted RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 MVPQ14764 893 aaKnown RBP10.05□□□□□ -0.8
UBR4-206ENST00000419533 CYP46A1Q9Y6A2 500 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 AKAP2Q9Y2D5 859 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 ADGRL3Q9HAR2 1447 aa10.05□□□□□ -0.8
UBR4-206ENST00000419533 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
UBR4-206ENST00000419533 SDF4Q9BRK5 362 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
UBR4-206ENST00000419533 BCAR3O75815 825 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 NEK4P51957 841 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 AK7Q96M32 723 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 ODF2Q5BJF6 829 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 ARID3AQ99856 593 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 LRP2BPQ9P2M1 347 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 SPATA31A6Q5VVP1 1343 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 LRRIQ1Q96JM4 1722 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 KDM4AO75164 1064 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 DUSP27Q5VZP5 1158 aa10.04□□□□□ -0.8
UBR4-206ENST00000419533 TEX13AQ9BXU3 409 aaPredicted RBP10.04□□□□□ -0.8
UBR4-206ENST00000419533 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
UBR4-206ENST00000419533 BRINP3Q76B58 766 aa10.03□□□□□ -0.8
UBR4-206ENST00000419533 ANKARQ7Z5J8 1434 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms