RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 LY75O60449 1722 aa16.2■□□□□ 0.18
TMEM253-201ENST00000418511 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
TMEM253-201ENST00000418511 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
TMEM253-201ENST00000418511 CABP4P57796 275 aa16.19■□□□□ 0.18
TMEM253-201ENST00000418511 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
TMEM253-201ENST00000418511 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
TMEM253-201ENST00000418511 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
TMEM253-201ENST00000418511 BAG6P46379 1132 aa16.19■□□□□ 0.18
TMEM253-201ENST00000418511 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
TMEM253-201ENST00000418511 NUP188Q5SRE5 1749 aa16.18■□□□□ 0.18
TMEM253-201ENST00000418511 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
TMEM253-201ENST00000418511 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
TMEM253-201ENST00000418511 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
TMEM253-201ENST00000418511 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
TMEM253-201ENST00000418511 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
TMEM253-201ENST00000418511 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
TMEM253-201ENST00000418511 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
TMEM253-201ENST00000418511 TEFQ10587 303 aa16.15■□□□□ 0.18
TMEM253-201ENST00000418511 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
TMEM253-201ENST00000418511 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
TMEM253-201ENST00000418511 EZH2Q15910 746 aaKnown RBP16.14■□□□□ 0.18
TMEM253-201ENST00000418511 ATG3Q9NT62 314 aa16.14■□□□□ 0.18
TMEM253-201ENST00000418511 PALLDQ8WX93 1383 aa16.14■□□□□ 0.17
TMEM253-201ENST00000418511 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
TMEM253-201ENST00000418511 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
TMEM253-201ENST00000418511 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
TMEM253-201ENST00000418511 PLSCR1O15162 318 aa16.12■□□□□ 0.17
TMEM253-201ENST00000418511 KCNQ4P56696 695 aa16.12■□□□□ 0.17
TMEM253-201ENST00000418511 PROM2Q8N271 834 aa16.12■□□□□ 0.17
TMEM253-201ENST00000418511 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
TMEM253-201ENST00000418511 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
TMEM253-201ENST00000418511 C5P01031 1676 aa16.11■□□□□ 0.17
TMEM253-201ENST00000418511 LRP5O75197 1615 aa16.11■□□□□ 0.17
TMEM253-201ENST00000418511 TJP1Q07157 1748 aa16.1■□□□□ 0.17
TMEM253-201ENST00000418511 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
TMEM253-201ENST00000418511 KCNQ3O43525 872 aa16.1■□□□□ 0.17
TMEM253-201ENST00000418511 TXNRD1Q16881 649 aa16.1■□□□□ 0.17
TMEM253-201ENST00000418511 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
TMEM253-201ENST00000418511 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
TMEM253-201ENST00000418511 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
TMEM253-201ENST00000418511 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
TMEM253-201ENST00000418511 SLC4A9Q96Q91 983 aa16.09■□□□□ 0.17
TMEM253-201ENST00000418511 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
TMEM253-201ENST00000418511 LRRC4BQ9NT99 713 aa16.09■□□□□ 0.17
TMEM253-201ENST00000418511 COL5A3P25940 1745 aaPredicted RBP16.09■□□□□ 0.17
TMEM253-201ENST00000418511 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.17
TMEM253-201ENST00000418511 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.16
TMEM253-201ENST00000418511 SIK1P57059 783 aa16.08■□□□□ 0.16
TMEM253-201ENST00000418511 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
TMEM253-201ENST00000418511 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
TMEM253-201ENST00000418511 ZNF790Q6PG37 636 aa16.08■□□□□ 0.16
TMEM253-201ENST00000418511 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
TMEM253-201ENST00000418511 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
TMEM253-201ENST00000418511 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
TMEM253-201ENST00000418511 TTC5Q8N0Z6 440 aa16.07■□□□□ 0.16
TMEM253-201ENST00000418511 CICQ96RK0 1608 aaPredicted RBP16.07■□□□□ 0.16
TMEM253-201ENST00000418511 TUBGCP6Q96RT7 1819 aa16.06■□□□□ 0.16
TMEM253-201ENST00000418511 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
TMEM253-201ENST00000418511 ITPK1Q13572 414 aa16.05■□□□□ 0.16
TMEM253-201ENST00000418511 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
TMEM253-201ENST00000418511 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
TMEM253-201ENST00000418511 ATP6V1AP38606 617 aa16.04■□□□□ 0.16
TMEM253-201ENST00000418511 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
TMEM253-201ENST00000418511 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
TMEM253-201ENST00000418511 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
TMEM253-201ENST00000418511 LAMB4A4D0S4 1761 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 CHL1O00533 1208 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 ZNF853P0CG23 659 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
TMEM253-201ENST00000418511 LINC00116Q8NCU8 138 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 ANO8Q9HCE9 1232 aaPredicted RBP16.03■□□□□ 0.16
TMEM253-201ENST00000418511 MBIPQ9NS73 344 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 IFT57Q9NWB7 429 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
TMEM253-201ENST00000418511 HEG1Q9ULI3 1381 aa16.02■□□□□ 0.16
TMEM253-201ENST00000418511 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.15
TMEM253-201ENST00000418511 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.15
TMEM253-201ENST00000418511 DNAJC10Q8IXB1 793 aa16.02■□□□□ 0.15
TMEM253-201ENST00000418511 NGEFQ8N5V2 710 aa16.02■□□□□ 0.15
TMEM253-201ENST00000418511 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.15
TMEM253-201ENST00000418511 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.15
TMEM253-201ENST00000418511 UBR3Q6ZT12 1888 aa16.02■□□□□ 0.15
TMEM253-201ENST00000418511 EIF4A1P60842 406 aaKnown RBP16.01■□□□□ 0.15
TMEM253-201ENST00000418511 GNAI1P63096 354 aa16.01■□□□□ 0.15
TMEM253-201ENST00000418511 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
TMEM253-201ENST00000418511 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
TMEM253-201ENST00000418511 CASZ1Q86V15 1759 aa16■□□□□ 0.15
TMEM253-201ENST00000418511 ZNF827Q17R98 1081 aa16■□□□□ 0.15
TMEM253-201ENST00000418511 WDR63Q8IWG1 891 aa16■□□□□ 0.15
TMEM253-201ENST00000418511 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
TMEM253-201ENST00000418511 IL16Q14005 1332 aa15.99■□□□□ 0.15
TMEM253-201ENST00000418511 VSIG10Q8N0Z9 540 aa15.99■□□□□ 0.15
TMEM253-201ENST00000418511 QSER1Q2KHR3 1735 aa15.98■□□□□ 0.15
TMEM253-201ENST00000418511 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
TMEM253-201ENST00000418511 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
TMEM253-201ENST00000418511 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
TMEM253-201ENST00000418511 SNRPA1P09661 255 aaKnown RBP15.97■□□□□ 0.15
TMEM253-201ENST00000418511 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
TMEM253-201ENST00000418511 SMIM5Q71RC9 77 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms