RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 CEMIPQ8WUJ3 1361 aa28.29■■■□□ 2.12
HMCES-203ENST00000417226 PALLDQ8WX93 1383 aa28.29■■■□□ 2.12
HMCES-203ENST00000417226 TMPOP42166 694 aaKnown RBP28.28■■■□□ 2.12
HMCES-203ENST00000417226 MCM10Q7L590 875 aa28.28■■■□□ 2.12
HMCES-203ENST00000417226 FAM9BQ8IZU0 186 aa28.28■■■□□ 2.12
HMCES-203ENST00000417226 RRP7AQ9Y3A4 280 aaKnown RBP28.28■■■□□ 2.12
HMCES-203ENST00000417226 HTATSF1O43719 755 aaKnown RBP28.27■■■□□ 2.12
HMCES-203ENST00000417226 DCTN1Q14203 1278 aa28.27■■■□□ 2.12
HMCES-203ENST00000417226 ASAP1Q9ULH1 1129 aa28.27■■■□□ 2.12
HMCES-203ENST00000417226 RIPK4P57078 832 aa28.27■■■□□ 2.12
HMCES-203ENST00000417226 TEFQ10587 303 aa28.27■■■□□ 2.12
HMCES-203ENST00000417226 NEUROD2Q15784 382 aa28.27■■■□□ 2.12
HMCES-203ENST00000417226 TXNRD1Q16881 649 aa28.27■■■□□ 2.12
HMCES-203ENST00000417226 PAPPAQ13219 1627 aa28.25■■■□□ 2.11
HMCES-203ENST00000417226 PROM2Q8N271 834 aa28.25■■■□□ 2.11
HMCES-203ENST00000417226 SMARCC1Q92922 1105 aaPredicted RBP28.25■■■□□ 2.11
HMCES-203ENST00000417226 ATG3Q9NT62 314 aa28.24■■■□□ 2.11
HMCES-203ENST00000417226 APAF1O14727 1248 aa28.23■■■□□ 2.11
HMCES-203ENST00000417226 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
HMCES-203ENST00000417226 THUMPD2Q9BTF0 503 aaKnown RBP28.21■■■□□ 2.11
HMCES-203ENST00000417226 KCNQ4P56696 695 aa28.2■■■□□ 2.1
HMCES-203ENST00000417226 SLC27A3Q5K4L6 730 aa28.2■■■□□ 2.1
HMCES-203ENST00000417226 LRRC4BQ9NT99 713 aa28.2■■■□□ 2.1
HMCES-203ENST00000417226 CCNL1Q9UK58 526 aaPredicted RBP28.2■■■□□ 2.1
HMCES-203ENST00000417226 C5P01031 1676 aa28.19■■■□□ 2.1
HMCES-203ENST00000417226 SENP3-EIF4A1A0A087X0R7 540 aa28.18■■■□□ 2.1
HMCES-203ENST00000417226 SLC39A6Q13433 755 aa28.18■■■□□ 2.1
HMCES-203ENST00000417226 TAF1LQ8IZX4 1826 aa28.18■■■□□ 2.1
HMCES-203ENST00000417226 UBR2Q8IWV8 1755 aa28.18■■■□□ 2.1
HMCES-203ENST00000417226 LOC102724428A0A0B4J2F2 783 aa28.16■■■□□ 2.1
HMCES-203ENST00000417226 SIK1P57059 783 aa28.16■■■□□ 2.1
HMCES-203ENST00000417226 TRIM35Q9UPQ4 493 aa28.16■■■□□ 2.1
HMCES-203ENST00000417226 PTCD1O75127 700 aaKnown RBP28.15■■■□□ 2.1
HMCES-203ENST00000417226 RBM42Q9BTD8 480 aaKnown RBP28.15■■■□□ 2.1
HMCES-203ENST00000417226 BTBD11A6QL63 1104 aa28.15■■■□□ 2.1
HMCES-203ENST00000417226 KCPQ6ZWJ8 1503 aa28.14■■■□□ 2.1
HMCES-203ENST00000417226 ZNF831Q5JPB2 1677 aa28.14■■■□□ 2.1
HMCES-203ENST00000417226 TTC5Q8N0Z6 440 aa28.13■■■□□ 2.09
HMCES-203ENST00000417226 KDM3BQ7LBC6 1761 aa28.12■■■□□ 2.09
HMCES-203ENST00000417226 TAF7Q15545 349 aaPredicted RBP28.12■■■□□ 2.09
HMCES-203ENST00000417226 ANO8Q9HCE9 1232 aaPredicted RBP28.12■■■□□ 2.09
HMCES-203ENST00000417226 ATP6V1AP38606 617 aa28.11■■■□□ 2.09
HMCES-203ENST00000417226 NBPF14Q5TI25 921 aa28.11■■■□□ 2.09
HMCES-203ENST00000417226 ZNF790Q6PG37 636 aa28.11■■■□□ 2.09
HMCES-203ENST00000417226 TJP1Q07157 1748 aa28.11■■■□□ 2.09
HMCES-203ENST00000417226 SLC4A9Q96Q91 983 aa28.1■■■□□ 2.09
HMCES-203ENST00000417226 MIS18AQ9NYP9 233 aa28.09■■■□□ 2.09
HMCES-203ENST00000417226 COL5A3P25940 1745 aaPredicted RBP28.09■■■□□ 2.09
HMCES-203ENST00000417226 C4BP0C0L5 1744 aa28.09■■■□□ 2.09
HMCES-203ENST00000417226 CICQ96RK0 1608 aaPredicted RBP28.09■■■□□ 2.09
HMCES-203ENST00000417226 ITPK1Q13572 414 aa28.08■■■□□ 2.09
HMCES-203ENST00000417226 KCNQ3O43525 872 aa28.08■■■□□ 2.09
HMCES-203ENST00000417226 STK32BQ9NY57 414 aa28.07■■■□□ 2.08
HMCES-203ENST00000417226 TUBGCP6Q96RT7 1819 aa28.06■■■□□ 2.08
HMCES-203ENST00000417226 ZNF827Q17R98 1081 aa28.06■■■□□ 2.08
HMCES-203ENST00000417226 LINC00116Q8NCU8 138 aa28.06■■■□□ 2.08
HMCES-203ENST00000417226 SALL2Q9Y467 1007 aaPredicted RBP28.06■■■□□ 2.08
HMCES-203ENST00000417226 R3HDM1Q15032 1099 aaKnown RBP28.05■■■□□ 2.08
HMCES-203ENST00000417226 ZNF496Q96IT1 587 aaPredicted RBP28.05■■■□□ 2.08
HMCES-203ENST00000417226 PSDA5PKW4 1024 aaPredicted RBP28.04■■■□□ 2.08
HMCES-203ENST00000417226 SLC15A2Q16348 729 aa28.03■■■□□ 2.08
HMCES-203ENST00000417226 FMNL2Q96PY5 1086 aa28.03■■■□□ 2.08
HMCES-203ENST00000417226 TSPYL4Q9UJ04 414 aa28.03■■■□□ 2.08
HMCES-203ENST00000417226 LAS1LQ9Y4W2 734 aaKnown RBP28.03■■■□□ 2.08
HMCES-203ENST00000417226 HMGB2P26583 209 aaKnown RBP28.02■■■□□ 2.08
HMCES-203ENST00000417226 CCDC27Q2M243 656 aa28.02■■■□□ 2.08
HMCES-203ENST00000417226 AKT1S1Q96B36 256 aa28.02■■■□□ 2.08
HMCES-203ENST00000417226 HEG1Q9ULI3 1381 aa28.02■■■□□ 2.08
HMCES-203ENST00000417226 WWC1Q8IX03 1113 aa28.01■■■□□ 2.07
HMCES-203ENST00000417226 VSIG10Q8N0Z9 540 aa28.01■■■□□ 2.07
HMCES-203ENST00000417226 QSER1Q2KHR3 1735 aa28■■■□□ 2.07
HMCES-203ENST00000417226 MYH14Q7Z406 1995 aaKnown RBP28■■■□□ 2.07
HMCES-203ENST00000417226 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
HMCES-203ENST00000417226 DNAJC10Q8IXB1 793 aa28■■■□□ 2.07
HMCES-203ENST00000417226 UBR3Q6ZT12 1888 aa28■■■□□ 2.07
HMCES-203ENST00000417226 NCBP3Q53F19 620 aaKnown RBP27.99■■■□□ 2.07
HMCES-203ENST00000417226 AK7Q96M32 723 aa27.99■■■□□ 2.07
HMCES-203ENST00000417226 BABAM1Q9NWV8 329 aa27.99■■■□□ 2.07
HMCES-203ENST00000417226 TFCP2L1Q9NZI6 479 aa27.99■■■□□ 2.07
HMCES-203ENST00000417226 CHL1O00533 1208 aa27.96■■■□□ 2.07
HMCES-203ENST00000417226 CFAP44Q96MT7 982 aa27.96■■■□□ 2.07
HMCES-203ENST00000417226 CNTNAP4Q9C0A0 1308 aa27.96■■■□□ 2.07
HMCES-203ENST00000417226 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.07
HMCES-203ENST00000417226 IFT57Q9NWB7 429 aa27.95■■■□□ 2.07
HMCES-203ENST00000417226 LAMB4A4D0S4 1761 aa27.95■■■□□ 2.07
HMCES-203ENST00000417226 GNPATO15228 680 aa27.95■■■□□ 2.06
HMCES-203ENST00000417226 CRKLP46109 303 aaKnown RBP27.95■■■□□ 2.06
HMCES-203ENST00000417226 NGEFQ8N5V2 710 aa27.95■■■□□ 2.06
HMCES-203ENST00000417226 CASZ1Q86V15 1759 aa27.94■■■□□ 2.06
HMCES-203ENST00000417226 SNRPA1P09661 255 aaKnown RBP27.94■■■□□ 2.06
HMCES-203ENST00000417226 GNAI1P63096 354 aa27.94■■■□□ 2.06
HMCES-203ENST00000417226 PRAMEF22A3QJZ6 481 aa27.93■■■□□ 2.06
HMCES-203ENST00000417226 CYP19A1P11511 503 aaPredicted RBP27.93■■■□□ 2.06
HMCES-203ENST00000417226 PNPLA7Q6ZV29 1317 aa27.92■■■□□ 2.06
HMCES-203ENST00000417226 ZNF853P0CG23 659 aa27.92■■■□□ 2.06
HMCES-203ENST00000417226 RC3H1Q5TC82 1133 aaKnown RBP27.92■■■□□ 2.06
HMCES-203ENST00000417226 AMIGO3Q86WK7 504 aa27.92■■■□□ 2.06
HMCES-203ENST00000417226 MBIPQ9NS73 344 aa27.92■■■□□ 2.06
HMCES-203ENST00000417226 STARD3NLO95772 234 aa27.91■■■□□ 2.06
HMCES-203ENST00000417226 TEX13AQ9BXU3 409 aaPredicted RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms