RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
CHRNA1-206ENST00000416004 CDCA7LQ96GN5 454 aa12.1□□□□□ -0.47
CHRNA1-206ENST00000416004 QSER1Q2KHR3 1735 aa12.1□□□□□ -0.47
CHRNA1-206ENST00000416004 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
CHRNA1-206ENST00000416004 CASZ1Q86V15 1759 aa12.1□□□□□ -0.47
CHRNA1-206ENST00000416004 MSH5O43196 834 aa12.1□□□□□ -0.47
CHRNA1-206ENST00000416004 AEBP1Q8IUX7 1158 aa12.1□□□□□ -0.47
CHRNA1-206ENST00000416004 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 C5P01031 1676 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 FCHSD2O94868 740 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
CHRNA1-206ENST00000416004 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 CABP4P57796 275 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 POLD1P28340 1107 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 AK7Q96M32 723 aa12.08□□□□□ -0.48
CHRNA1-206ENST00000416004 KDRP35968 1356 aa12.07□□□□□ -0.48
CHRNA1-206ENST00000416004 NEFMP07197 916 aa12.07□□□□□ -0.48
CHRNA1-206ENST00000416004 PIGBQ92521 554 aa12.07□□□□□ -0.48
CHRNA1-206ENST00000416004 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-206ENST00000416004 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
CHRNA1-206ENST00000416004 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
CHRNA1-206ENST00000416004 WWC1Q8IX03 1113 aa12.06□□□□□ -0.48
CHRNA1-206ENST00000416004 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
CHRNA1-206ENST00000416004 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
CHRNA1-206ENST00000416004 TMPOP42166 694 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-206ENST00000416004 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
CHRNA1-206ENST00000416004 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
CHRNA1-206ENST00000416004 KCNQ4P56696 695 aa12.05□□□□□ -0.48
CHRNA1-206ENST00000416004 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
CHRNA1-206ENST00000416004 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 SIK1P57059 783 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 GAS2L2Q8NHY3 880 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
CHRNA1-206ENST00000416004 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
CHRNA1-206ENST00000416004 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
CHRNA1-206ENST00000416004 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
CHRNA1-206ENST00000416004 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
CHRNA1-206ENST00000416004 SLFN5Q08AF3 891 aa12.02□□□□□ -0.48
CHRNA1-206ENST00000416004 NFE2L2Q16236 605 aa12.02□□□□□ -0.48
CHRNA1-206ENST00000416004 ARXQ96QS3 562 aa12.02□□□□□ -0.48
CHRNA1-206ENST00000416004 RIPK4P57078 832 aa12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 PDGFDQ9GZP0 370 aaPredicted RBP12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-206ENST00000416004 NFATC2IPQ8NCF5 419 aa12.01□□□□□ -0.49
CHRNA1-206ENST00000416004 ZNF831Q5JPB2 1677 aa12.01□□□□□ -0.49
CHRNA1-206ENST00000416004 KDM6AO15550 1401 aaPredicted RBP12□□□□□ -0.49
CHRNA1-206ENST00000416004 SSFA2P28290 1259 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 TEFQ10587 303 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 KLHL34Q8N239 644 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 PHF14O94880 888 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
CHRNA1-206ENST00000416004 WDR63Q8IWG1 891 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
CHRNA1-206ENST00000416004 SLC52A2Q9HAB3 445 aa12□□□□□ -0.49
CHRNA1-206ENST00000416004 E9PSI1 815 aa11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 GNPATO15228 680 aa11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 PTGER2P43116 358 aa11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 THUMPD2Q9BTF0 503 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 RTCBQ9Y3I0 505 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 MAP3K5Q99683 1374 aa11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 UBR3Q6ZT12 1888 aa11.99□□□□□ -0.49
CHRNA1-206ENST00000416004 PTCD1O75127 700 aaKnown RBP11.98□□□□□ -0.49
CHRNA1-206ENST00000416004 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
CHRNA1-206ENST00000416004 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
CHRNA1-206ENST00000416004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
CHRNA1-206ENST00000416004 TRAPPC3LQ5T215 181 aa11.97□□□□□ -0.49
CHRNA1-206ENST00000416004 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
CHRNA1-206ENST00000416004 LINC00116Q8NCU8 138 aa11.97□□□□□ -0.49
CHRNA1-206ENST00000416004 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
CHRNA1-206ENST00000416004 SRCAPQ6ZRS2 3230 aa11.96□□□□□ -0.49
CHRNA1-206ENST00000416004 ADRA2BP18089 450 aa11.96□□□□□ -0.49
CHRNA1-206ENST00000416004 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
CHRNA1-206ENST00000416004 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-206ENST00000416004 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.5
CHRNA1-206ENST00000416004 COL24A1Q17RW2 1714 aa11.96□□□□□ -0.5
CHRNA1-206ENST00000416004 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 SYT17Q9BSW7 474 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms