RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCA4-202ENST00000413806 MAP3K11Q16584 847 aa16.12■□□□□ 0.17
SMARCA4-202ENST00000413806 DYDC1Q8WWB3 177 aa16.12■□□□□ 0.17
SMARCA4-202ENST00000413806 IKQ13123 557 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-202ENST00000413806 LUC7LQ9NQ29 371 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 DISP3Q9P2K9 1392 aa16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 LARP1Q6PKG0 1096 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 ANKRD36BQ8N2N9 1353 aa16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 BRPF1P55201 1214 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 INCENPQ9NQS7 918 aa16.11■□□□□ 0.17
SMARCA4-202ENST00000413806 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
SMARCA4-202ENST00000413806 FBXO3Q9UK99 471 aa16.1■□□□□ 0.17
SMARCA4-202ENST00000413806 UGGT2Q9NYU1 1516 aa16.1■□□□□ 0.17
SMARCA4-202ENST00000413806 KRT18P05783 430 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-202ENST00000413806 NOS1P29475 1434 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 NUP160Q12769 1436 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 TRIM27P14373 513 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 GOLGA6L10A6NI86 522 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-202ENST00000413806 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.17
SMARCA4-202ENST00000413806 CCDC183Q5T5S1 534 aa16.08■□□□□ 0.17
SMARCA4-202ENST00000413806 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.17
SMARCA4-202ENST00000413806 SOGA3Q5TF21 947 aa16.08■□□□□ 0.17
SMARCA4-202ENST00000413806 NME9Q86XW9 330 aa16.08■□□□□ 0.17
SMARCA4-202ENST00000413806 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.17
SMARCA4-202ENST00000413806 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 SYCE3A1L190 88 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 TDO2P48775 406 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 BMP2KLQ5H9B9 411 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-202ENST00000413806 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 PRDM11Q9NQV5 511 aa16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 TMCO3Q6UWJ1 677 aa16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 GPATCH8Q9UKJ3 1502 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-202ENST00000413806 PPP4R3BQ5MIZ7 849 aa16.06■□□□□ 0.16
SMARCA4-202ENST00000413806 CCDC83Q8IWF9 413 aa16.06■□□□□ 0.16
SMARCA4-202ENST00000413806 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
SMARCA4-202ENST00000413806 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
SMARCA4-202ENST00000413806 KIF2AO00139 706 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 SYCP1Q15431 976 aa16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 STARD3NLO95772 234 aa16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 FAM193AP78312 1265 aa16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-202ENST00000413806 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 ERLIN2O94905 339 aa16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 TIGD1Q96MW7 591 aa16.04■□□□□ 0.16
SMARCA4-202ENST00000413806 FANCAO15360 1455 aa16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 ARHGAP45Q92619 1136 aa16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 ANO10Q9NW15 660 aa16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 UBXN4Q92575 508 aa16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 LRRFIP2Q9Y608 721 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-202ENST00000413806 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 EIF2AK4Q9P2K8 1649 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 SHTN1A0MZ66 631 aa16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 GTF2A1P52655 376 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 ZFYVE27Q5T4F4 411 aa16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 CTAGE5O15320 804 aa16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 DDX11Q96FC9 970 aa16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-202ENST00000413806 DYNC1I1O14576 645 aa16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 RBM25P49756 843 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 CCDC181Q5TID7 509 aa16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 LRP2BPQ9P2M1 347 aa16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 SSFA2P28290 1259 aa16.02■□□□□ 0.15
SMARCA4-202ENST00000413806 METTL24Q5JXM2 366 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms