RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 FHDC1Q9C0D6 1143 aaPredicted RBP11.71□□□□□ -0.53
HCG18-234ENST00000413358 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
HCG18-234ENST00000413358 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
HCG18-234ENST00000413358 CALD1Q05682 793 aaKnown RBP11.7□□□□□ -0.54
HCG18-234ENST00000413358 CCDC27Q2M243 656 aa11.7□□□□□ -0.54
HCG18-234ENST00000413358 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
HCG18-234ENST00000413358 ARXQ96QS3 562 aa11.7□□□□□ -0.54
HCG18-234ENST00000413358 HSP90AB1P08238 724 aaKnown RBP11.69□□□□□ -0.54
HCG18-234ENST00000413358 PHKG2P15735 406 aa11.69□□□□□ -0.54
HCG18-234ENST00000413358 POLD1P28340 1107 aa11.69□□□□□ -0.54
HCG18-234ENST00000413358 PTGER2P43116 358 aa11.69□□□□□ -0.54
HCG18-234ENST00000413358 WWC1Q8IX03 1113 aa11.69□□□□□ -0.54
HCG18-234ENST00000413358 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
HCG18-234ENST00000413358 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
HCG18-234ENST00000413358 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
HCG18-234ENST00000413358 HMGB2P26583 209 aaKnown RBP11.68□□□□□ -0.54
HCG18-234ENST00000413358 GPR162Q16538 588 aa11.68□□□□□ -0.54
HCG18-234ENST00000413358 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
HCG18-234ENST00000413358 MCM10Q7L590 875 aa11.68□□□□□ -0.54
HCG18-234ENST00000413358 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
HCG18-234ENST00000413358 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
HCG18-234ENST00000413358 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
HCG18-234ENST00000413358 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 CYP27B1O15528 508 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 SLC16A10Q8TF71 515 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
HCG18-234ENST00000413358 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
HCG18-234ENST00000413358 KDM6AO15550 1401 aaPredicted RBP11.67□□□□□ -0.54
HCG18-234ENST00000413358 TEFQ10587 303 aa11.66□□□□□ -0.54
HCG18-234ENST00000413358 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
HCG18-234ENST00000413358 WDR63Q8IWG1 891 aa11.66□□□□□ -0.54
HCG18-234ENST00000413358 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
HCG18-234ENST00000413358 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
HCG18-234ENST00000413358 ADAMTS7Q9UKP4 1686 aa11.65□□□□□ -0.54
HCG18-234ENST00000413358 IL16Q14005 1332 aa11.65□□□□□ -0.54
HCG18-234ENST00000413358 MRC1P22897 1456 aa11.65□□□□□ -0.54
HCG18-234ENST00000413358 E9PSI1 815 aa11.65□□□□□ -0.54
HCG18-234ENST00000413358 RNMTO43148 476 aaKnown RBP11.65□□□□□ -0.54
HCG18-234ENST00000413358 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
HCG18-234ENST00000413358 DCAF5Q96JK2 942 aa11.65□□□□□ -0.54
HCG18-234ENST00000413358 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
HCG18-234ENST00000413358 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.55
HCG18-234ENST00000413358 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
HCG18-234ENST00000413358 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
HCG18-234ENST00000413358 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
HCG18-234ENST00000413358 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
HCG18-234ENST00000413358 VIRMAQ69YN4 1812 aaKnown RBP11.64□□□□□ -0.55
HCG18-234ENST00000413358 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
HCG18-234ENST00000413358 GNAI1P63096 354 aa11.63□□□□□ -0.55
HCG18-234ENST00000413358 IL17REQ8NFR9 667 aa11.63□□□□□ -0.55
HCG18-234ENST00000413358 SGIP1Q9BQI5 828 aa11.63□□□□□ -0.55
HCG18-234ENST00000413358 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
HCG18-234ENST00000413358 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
HCG18-234ENST00000413358 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
HCG18-234ENST00000413358 CABP4P57796 275 aa11.62□□□□□ -0.55
HCG18-234ENST00000413358 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
HCG18-234ENST00000413358 ZNF827Q17R98 1081 aa11.62□□□□□ -0.55
HCG18-234ENST00000413358 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
HCG18-234ENST00000413358 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
HCG18-234ENST00000413358 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
HCG18-234ENST00000413358 FANCIQ9NVI1 1328 aa11.61□□□□□ -0.55
HCG18-234ENST00000413358 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
HCG18-234ENST00000413358 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
HCG18-234ENST00000413358 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
HCG18-234ENST00000413358 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
HCG18-234ENST00000413358 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
HCG18-234ENST00000413358 CCNL1Q9UK58 526 aaPredicted RBP11.61□□□□□ -0.55
HCG18-234ENST00000413358 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
HCG18-234ENST00000413358 ERVV-2B6SEH9 535 aa11.6□□□□□ -0.55
HCG18-234ENST00000413358 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
HCG18-234ENST00000413358 TSR2Q969E8 191 aaKnown RBP11.6□□□□□ -0.55
HCG18-234ENST00000413358 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
HCG18-234ENST00000413358 TMOD3Q9NYL9 352 aa11.6□□□□□ -0.55
HCG18-234ENST00000413358 BTAF1O14981 1849 aa11.6□□□□□ -0.55
HCG18-234ENST00000413358 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
HCG18-234ENST00000413358 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
HCG18-234ENST00000413358 DUSP27Q5VZP5 1158 aa11.59□□□□□ -0.55
HCG18-234ENST00000413358 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
HCG18-234ENST00000413358 KDM3BQ7LBC6 1761 aa11.59□□□□□ -0.55
HCG18-234ENST00000413358 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
HCG18-234ENST00000413358 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
HCG18-234ENST00000413358 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
HCG18-234ENST00000413358 PIAS4Q8N2W9 510 aaPredicted RBP11.58□□□□□ -0.56
HCG18-234ENST00000413358 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
HCG18-234ENST00000413358 PAPPAQ13219 1627 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 CHD4Q14839 1912 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 CHL1O00533 1208 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
HCG18-234ENST00000413358 ZNF853P0CG23 659 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 KCNQ4P56696 695 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 FLAD1Q8NFF5 587 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
HCG18-234ENST00000413358 ITGB4P16144 1822 aa11.56□□□□□ -0.56
HCG18-234ENST00000413358 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
HCG18-234ENST00000413358 EXOSC9Q06265 439 aaKnown RBP11.54□□□□□ -0.56
HCG18-234ENST00000413358 SLC39A6Q13433 755 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms