RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CCDC27Q2M243 656 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 NFXL1Q6ZNB6 911 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 KIF18AQ8NI77 898 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 TBC1D32Q96NH3 1257 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 ERICH2A1L162 156 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 NF2P35240 595 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 LRCH2Q5VUJ6 765 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 MPHOSPH10O00566 681 aaKnown RBP10.01□□□□□ -0.81
PBRM1-209ENST00000412587 DHX16O60231 1041 aaKnown RBP10.01□□□□□ -0.81
PBRM1-209ENST00000412587 PTPN14Q15678 1187 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 TBC1D2BQ9UPU7 963 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 ZSCAN23Q3MJ62 389 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 CCDC192P0DO97 292 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 LMAN1P49257 510 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 MCM10Q7L590 875 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 CADPS2Q86UW7 1296 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 CNNM1Q9NRU3 951 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
PBRM1-209ENST00000412587 BRMS1Q9HCU9 246 aa10.01□□□□□ -0.81
PBRM1-209ENST00000412587 SF3B2Q13435 895 aaKnown RBP10□□□□□ -0.81
PBRM1-209ENST00000412587 KRT28Q7Z3Y7 464 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 TMX1Q9H3N1 280 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 MRVI1Q9Y6F6 885 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 EIF4G3O43432 1585 aaKnown RBP10□□□□□ -0.81
PBRM1-209ENST00000412587 ATP6V1AP38606 617 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 AMOTQ4VCS5 1084 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 LRSAM1Q6UWE0 723 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 RUFY1Q96T51 708 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 MAP2K2P36507 400 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 USHBP1Q8N6Y0 703 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 ZNF830Q96NB3 372 aaPredicted RBP10□□□□□ -0.81
PBRM1-209ENST00000412587 ABCC10Q5T3U5 1492 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 NUP160Q12769 1436 aa10□□□□□ -0.81
PBRM1-209ENST00000412587 DCTN1Q14203 1278 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 SMC3Q9UQE7 1217 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 CTDP1Q9Y5B0 961 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-209ENST00000412587 ITSN2Q9NZM3 1697 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 FYB1O15117 783 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 C16orf45Q96MC5 204 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-209ENST00000412587 LRRFIP2Q9Y608 721 aaKnown RBP9.99□□□□□ -0.81
PBRM1-209ENST00000412587 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 CTTNBP2Q8WZ74 1663 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 USP25Q9UHP3 1055 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 V9GYY5 206 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-209ENST00000412587 ACEP12821 1306 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
PBRM1-209ENST00000412587 PTCD1O75127 700 aaKnown RBP9.99□□□□□ -0.81
PBRM1-209ENST00000412587 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 ABCC11Q96J66 1382 aa9.99□□□□□ -0.81
PBRM1-209ENST00000412587 VPS37CA5D8V6 355 aaPredicted RBP9.98□□□□□ -0.81
PBRM1-209ENST00000412587 WDR62O43379 1518 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 BAG4O95429 457 aaKnown RBP9.98□□□□□ -0.81
PBRM1-209ENST00000412587 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
PBRM1-209ENST00000412587 SKIDA1Q1XH10 827 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 SIL1Q9H173 461 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 LRPPRCP42704 1394 aaKnown RBP9.98□□□□□ -0.81
PBRM1-209ENST00000412587 HIP1O00291 1037 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 SSFA2P28290 1259 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 CCDC158Q5M9N0 1113 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 KRBA2Q6ZNG9 492 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 NSD2O96028 1365 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 SRGAP3O43295 1099 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 STARD3NLO95772 234 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 NEFHP12036 1026 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 MCM2P49736 904 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 IRX5P78411 483 aaPredicted RBP9.98□□□□□ -0.81
PBRM1-209ENST00000412587 CCDC57Q2TAC2 916 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
PBRM1-209ENST00000412587 ABCC2Q92887 1545 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 ADCY5O95622 1261 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 DYDC1Q8WWB3 177 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 CPSF2Q9P2I0 782 aaKnown RBP9.97□□□□□ -0.81
PBRM1-209ENST00000412587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.97□□□□□ -0.81
PBRM1-209ENST00000412587 SMTNL1A8MU46 457 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 GBP6Q6ZN66 633 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 SHTN1A0MZ66 631 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 PSMA5P28066 241 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 PPM1EQ8WY54 764 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 GNL3LQ9NVN8 582 aaKnown RBP9.97□□□□□ -0.81
PBRM1-209ENST00000412587 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 KIAA1328Q86T90 577 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 PIBF1Q8WXW3 757 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 CENPHQ9H3R5 247 aa9.97□□□□□ -0.81
PBRM1-209ENST00000412587 SETSIPP0DME0 302 aa9.96□□□□□ -0.81
PBRM1-209ENST00000412587 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.81
PBRM1-209ENST00000412587 RPAP2Q8IXW5 612 aaPredicted RBP9.96□□□□□ -0.82
PBRM1-209ENST00000412587 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
PBRM1-209ENST00000412587 TTC39AQ5SRH9 613 aa9.96□□□□□ -0.82
PBRM1-209ENST00000412587 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
PBRM1-209ENST00000412587 RIMS2Q9UQ26 1411 aa9.96□□□□□ -0.82
PBRM1-209ENST00000412587 MPRIPQ6WCQ1 1025 aa9.95□□□□□ -0.82
PBRM1-209ENST00000412587 RPAINQ86UA6 219 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms