RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 LRP5O75197 1615 aa18.86■□□□□ 0.61
LIMS2-209ENST00000410038 CABP4P57796 275 aa18.85■□□□□ 0.61
LIMS2-209ENST00000410038 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
LIMS2-209ENST00000410038 SLC52A2Q9HAB3 445 aa18.85■□□□□ 0.61
LIMS2-209ENST00000410038 TEFQ10587 303 aa18.85■□□□□ 0.61
LIMS2-209ENST00000410038 CCDC27Q2M243 656 aa18.85■□□□□ 0.61
LIMS2-209ENST00000410038 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
LIMS2-209ENST00000410038 BCL11BQ9C0K0 894 aaPredicted RBP18.85■□□□□ 0.61
LIMS2-209ENST00000410038 TMOD3Q9NYL9 352 aa18.85■□□□□ 0.61
LIMS2-209ENST00000410038 PIGBQ92521 554 aa18.84■□□□□ 0.61
LIMS2-209ENST00000410038 NGEFQ8N5V2 710 aa18.83■□□□□ 0.61
LIMS2-209ENST00000410038 WWC1Q8IX03 1113 aa18.82■□□□□ 0.6
LIMS2-209ENST00000410038 PAPPAQ13219 1627 aa18.81■□□□□ 0.6
LIMS2-209ENST00000410038 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
LIMS2-209ENST00000410038 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
LIMS2-209ENST00000410038 KDM3BQ7LBC6 1761 aa18.79■□□□□ 0.6
LIMS2-209ENST00000410038 ZNF521Q96K83 1311 aa18.78■□□□□ 0.6
LIMS2-209ENST00000410038 ASAP1Q9ULH1 1129 aa18.78■□□□□ 0.6
LIMS2-209ENST00000410038 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
LIMS2-209ENST00000410038 LY75O60449 1722 aa18.77■□□□□ 0.6
LIMS2-209ENST00000410038 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
LIMS2-209ENST00000410038 APBA3O96018 575 aa18.77■□□□□ 0.6
LIMS2-209ENST00000410038 EN1Q05925 392 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-209ENST00000410038 ATG3Q9NT62 314 aa18.77■□□□□ 0.6
LIMS2-209ENST00000410038 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
LIMS2-209ENST00000410038 SLC39A6Q13433 755 aa18.76■□□□□ 0.59
LIMS2-209ENST00000410038 MIS18AQ9NYP9 233 aa18.76■□□□□ 0.59
LIMS2-209ENST00000410038 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
LIMS2-209ENST00000410038 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
LIMS2-209ENST00000410038 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
LIMS2-209ENST00000410038 CHL1O00533 1208 aa18.74■□□□□ 0.59
LIMS2-209ENST00000410038 ZNF790Q6PG37 636 aa18.74■□□□□ 0.59
LIMS2-209ENST00000410038 SMARCC1Q92922 1105 aaPredicted RBP18.74■□□□□ 0.59
LIMS2-209ENST00000410038 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
LIMS2-209ENST00000410038 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
LIMS2-209ENST00000410038 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
LIMS2-209ENST00000410038 IL16Q14005 1332 aa18.74■□□□□ 0.59
LIMS2-209ENST00000410038 PLSCR1O15162 318 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 KCNQ3O43525 872 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 BABAM1Q9NWV8 329 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 GNAI1P63096 354 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
LIMS2-209ENST00000410038 PSDA5PKW4 1024 aaPredicted RBP18.72■□□□□ 0.59
LIMS2-209ENST00000410038 TTC5Q8N0Z6 440 aa18.72■□□□□ 0.59
LIMS2-209ENST00000410038 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
LIMS2-209ENST00000410038 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
LIMS2-209ENST00000410038 ZNF831Q5JPB2 1677 aa18.7■□□□□ 0.58
LIMS2-209ENST00000410038 GOLGA2Q08379 1002 aa18.7■□□□□ 0.58
LIMS2-209ENST00000410038 CAMKK2Q96RR4 588 aa18.7■□□□□ 0.58
LIMS2-209ENST00000410038 MBIPQ9NS73 344 aa18.7■□□□□ 0.58
LIMS2-209ENST00000410038 ZBED9Q6R2W3 1325 aa18.7■□□□□ 0.58
LIMS2-209ENST00000410038 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
LIMS2-209ENST00000410038 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-209ENST00000410038 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
LIMS2-209ENST00000410038 LOC102724428A0A0B4J2F2 783 aa18.69■□□□□ 0.58
LIMS2-209ENST00000410038 SIK1P57059 783 aa18.69■□□□□ 0.58
LIMS2-209ENST00000410038 EZH2Q15910 746 aaKnown RBP18.69■□□□□ 0.58
LIMS2-209ENST00000410038 PROM2Q8N271 834 aa18.69■□□□□ 0.58
LIMS2-209ENST00000410038 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
LIMS2-209ENST00000410038 RREB1Q92766 1687 aa18.69■□□□□ 0.58
LIMS2-209ENST00000410038 TJP1Q07157 1748 aa18.68■□□□□ 0.58
LIMS2-209ENST00000410038 EIF4A1P60842 406 aaKnown RBP18.68■□□□□ 0.58
LIMS2-209ENST00000410038 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
LIMS2-209ENST00000410038 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
LIMS2-209ENST00000410038 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
LIMS2-209ENST00000410038 CICQ96RK0 1608 aaPredicted RBP18.68■□□□□ 0.58
LIMS2-209ENST00000410038 R3HDM1Q15032 1099 aaKnown RBP18.67■□□□□ 0.58
LIMS2-209ENST00000410038 CDCA7LQ96GN5 454 aa18.67■□□□□ 0.58
LIMS2-209ENST00000410038 FMNL2Q96PY5 1086 aa18.67■□□□□ 0.58
LIMS2-209ENST00000410038 C5P01031 1676 aa18.67■□□□□ 0.58
LIMS2-209ENST00000410038 KCNQ4P56696 695 aa18.66■□□□□ 0.58
LIMS2-209ENST00000410038 LRRC4BQ9NT99 713 aa18.66■□□□□ 0.58
LIMS2-209ENST00000410038 CCNL1Q9UK58 526 aaPredicted RBP18.66■□□□□ 0.58
LIMS2-209ENST00000410038 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
LIMS2-209ENST00000410038 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
LIMS2-209ENST00000410038 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
LIMS2-209ENST00000410038 SLC27A3Q5K4L6 730 aa18.66■□□□□ 0.58
LIMS2-209ENST00000410038 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
LIMS2-209ENST00000410038 E9PSI1 815 aa18.65■□□□□ 0.58
LIMS2-209ENST00000410038 ATP6V1AP38606 617 aa18.65■□□□□ 0.58
LIMS2-209ENST00000410038 NBPF14Q5TI25 921 aa18.65■□□□□ 0.58
LIMS2-209ENST00000410038 VSIG10Q8N0Z9 540 aa18.65■□□□□ 0.58
LIMS2-209ENST00000410038 MYH16Q9H6N6 1097 aa18.65■□□□□ 0.58
LIMS2-209ENST00000410038 NUP188Q5SRE5 1749 aa18.65■□□□□ 0.58
LIMS2-209ENST00000410038 ITPK1Q13572 414 aa18.64■□□□□ 0.57
LIMS2-209ENST00000410038 KRT24Q2M2I5 525 aa18.64■□□□□ 0.57
LIMS2-209ENST00000410038 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
LIMS2-209ENST00000410038 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
LIMS2-209ENST00000410038 GIGYF1O75420 1035 aaPredicted RBP18.63■□□□□ 0.57
LIMS2-209ENST00000410038 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
LIMS2-209ENST00000410038 TRMT2AQ8IZ69 625 aaKnown RBP18.63■□□□□ 0.57
LIMS2-209ENST00000410038 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
LIMS2-209ENST00000410038 DNAJC10Q8IXB1 793 aa18.62■□□□□ 0.57
LIMS2-209ENST00000410038 C8orf58Q8NAV2 365 aa18.61■□□□□ 0.57
LIMS2-209ENST00000410038 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
LIMS2-209ENST00000410038 LINC00116Q8NCU8 138 aa18.6■□□□□ 0.57
LIMS2-209ENST00000410038 USP16Q9Y5T5 823 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms