RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
PBRM1-208ENST00000410007 A0A087WZG4 1122 aa10.75□□□□□ -0.69
PBRM1-208ENST00000410007 TOM1O60784 492 aa10.75□□□□□ -0.69
PBRM1-208ENST00000410007 CAVIN1Q6NZI2 390 aaKnown RBP10.75□□□□□ -0.69
PBRM1-208ENST00000410007 WASF1Q92558 559 aa10.75□□□□□ -0.69
PBRM1-208ENST00000410007 NAP1L1P55209 391 aaKnown RBP10.75□□□□□ -0.69
PBRM1-208ENST00000410007 ANKRD18BA2A2Z9 1011 aa10.74□□□□□ -0.69
PBRM1-208ENST00000410007 PUS7Q96PZ0 661 aaKnown RBP10.74□□□□□ -0.69
PBRM1-208ENST00000410007 TRAPPC8Q9Y2L5 1435 aa10.74□□□□□ -0.69
PBRM1-208ENST00000410007 NASPP49321 788 aaPredicted RBP10.74□□□□□ -0.69
PBRM1-208ENST00000410007 MAGEC2Q9UBF1 373 aaPredicted RBP10.74□□□□□ -0.69
PBRM1-208ENST00000410007 F6X3S4 739 aa10.74□□□□□ -0.69
PBRM1-208ENST00000410007 SLC5A1P13866 664 aa10.74□□□□□ -0.69
PBRM1-208ENST00000410007 ADAMTS12P58397 1594 aa10.74□□□□□ -0.69
PBRM1-208ENST00000410007 ODF2Q5BJF6 829 aa10.74□□□□□ -0.69
PBRM1-208ENST00000410007 CEBPZQ03701 1054 aaKnown RBP10.74□□□□□ -0.69
PBRM1-208ENST00000410007 SNRPA1P09661 255 aaKnown RBP10.73□□□□□ -0.69
PBRM1-208ENST00000410007 ME1P48163 572 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 MAP3K12Q12852 859 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 WWC2Q6AWC2 1192 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 TRIM5Q9C035 493 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 FAM13BQ9NYF5 915 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
PBRM1-208ENST00000410007 KIAA0556O60303 1618 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 TMEM132AQ24JP5 1023 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
PBRM1-208ENST00000410007 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
PBRM1-208ENST00000410007 RALGAPBQ86X10 1494 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 CHRNA2Q15822 529 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 PDILTQ8N807 584 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 RNF214Q8ND24 703 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 ANKIB1Q9P2G1 1089 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 PIK3R4Q99570 1358 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 TSPY26PQ9H489 355 aa10.73□□□□□ -0.69
PBRM1-208ENST00000410007 STIM1Q13586 685 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 RPGRQ92834 1020 aaKnown RBP10.72□□□□□ -0.69
PBRM1-208ENST00000410007 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 ZBTB3Q9H5J0 574 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 CFAP45Q9UL16 551 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 PTPRKQ15262 1439 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 TRIM27P14373 513 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 USP5P45974 858 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 SMARCE1Q969G3 411 aa10.72□□□□□ -0.69
PBRM1-208ENST00000410007 CWC25Q9NXE8 425 aaPredicted RBP10.72□□□□□ -0.69
PBRM1-208ENST00000410007 DZIP1Q86YF9 867 aaKnown RBP10.71□□□□□ -0.69
PBRM1-208ENST00000410007 SLF2Q8IX21 1173 aa10.71□□□□□ -0.69
PBRM1-208ENST00000410007 CDC5LQ99459 802 aaKnown RBP10.71□□□□□ -0.69
PBRM1-208ENST00000410007 NAPBQ9H115 298 aa10.71□□□□□ -0.69
PBRM1-208ENST00000410007 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
PBRM1-208ENST00000410007 AK7Q96M32 723 aa10.71□□□□□ -0.69
PBRM1-208ENST00000410007 DHX8Q14562 1220 aaKnown RBP10.71□□□□□ -0.7
PBRM1-208ENST00000410007 HSP90AB2PQ58FF8 381 aa10.71□□□□□ -0.7
PBRM1-208ENST00000410007 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.71□□□□□ -0.7
PBRM1-208ENST00000410007 PPP1R42Q7Z4L9 355 aa10.71□□□□□ -0.7
PBRM1-208ENST00000410007 MNS1Q8NEH6 495 aa10.71□□□□□ -0.7
PBRM1-208ENST00000410007 C19orf44Q9H6X5 657 aa10.71□□□□□ -0.7
PBRM1-208ENST00000410007 MAP3K2Q9Y2U5 619 aa10.71□□□□□ -0.7
PBRM1-208ENST00000410007 SMC2O95347 1197 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 POLR3DP05423 398 aaPredicted RBP10.7□□□□□ -0.7
PBRM1-208ENST00000410007 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 ZCRB1Q8TBF4 217 aaKnown RBP10.7□□□□□ -0.7
PBRM1-208ENST00000410007 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
PBRM1-208ENST00000410007 CASTP20810 708 aaKnown RBP10.7□□□□□ -0.7
PBRM1-208ENST00000410007 GPTP24298 496 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 CCDC173Q0VFZ6 552 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 PRAG1Q86YV5 1406 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 CCDC196A0A1B0GTZ2 297 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 UBAP1LF5GYI3 381 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 SMARCA5O60264 1052 aaPredicted RBP10.7□□□□□ -0.7
PBRM1-208ENST00000410007 ABCC2Q92887 1545 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 MKNK2Q9HBH9 465 aa10.7□□□□□ -0.7
PBRM1-208ENST00000410007 TCOF1Q13428 1488 aaKnown RBP10.7□□□□□ -0.7
PBRM1-208ENST00000410007 HMGB1P09429 215 aaKnown RBP10.69□□□□□ -0.7
PBRM1-208ENST00000410007 CRACR2BQ8N4Y2 399 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-208ENST00000410007 CCDC8Q9H0W5 538 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-208ENST00000410007 TNMDQ9H2S6 317 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 PI4KAP2A4QPH2 592 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 PI4KAP1Q8N8J0 262 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 SPATA32Q96LK8 384 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 LDHAL6AQ6ZMR3 332 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 RNF41Q9H4P4 317 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-208ENST00000410007 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 WDR62O43379 1518 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 FAM83GA6ND36 823 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 MINDY4BA8MYZ0 360 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 ARHGAP45Q92619 1136 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 ECHDC1Q9NTX5 307 aa10.69□□□□□ -0.7
PBRM1-208ENST00000410007 PRPF40BQ6NWY9 871 aaKnown RBP10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ARGLU1Q9NWB6 273 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 CCP110O43303 1012 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ZFYVE27Q5T4F4 411 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
PBRM1-208ENST00000410007 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
PBRM1-208ENST00000410007 FAM43AQ8N2R8 423 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms