RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
GCFC2-202ENST00000409857 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
GCFC2-202ENST00000409857 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
GCFC2-202ENST00000409857 ITGB4P16144 1822 aa21.74■■□□□ 1.07
GCFC2-202ENST00000409857 FAM196AQ6ZSG2 479 aa21.74■■□□□ 1.07
GCFC2-202ENST00000409857 KDM6AO15550 1401 aaPredicted RBP21.73■■□□□ 1.07
GCFC2-202ENST00000409857 APAF1O14727 1248 aa21.73■■□□□ 1.07
GCFC2-202ENST00000409857 C20orf194Q5TEA3 1177 aa21.73■■□□□ 1.07
GCFC2-202ENST00000409857 MS4A1P11836 297 aa21.72■■□□□ 1.07
GCFC2-202ENST00000409857 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
GCFC2-202ENST00000409857 SIPA1L3O60292 1781 aaPredicted RBP21.72■■□□□ 1.07
GCFC2-202ENST00000409857 MRC1P22897 1456 aa21.72■■□□□ 1.07
GCFC2-202ENST00000409857 RIPK4P57078 832 aa21.71■■□□□ 1.07
GCFC2-202ENST00000409857 LMOD3Q0VAK6 560 aa21.71■■□□□ 1.07
GCFC2-202ENST00000409857 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
GCFC2-202ENST00000409857 ERVV-2B6SEH9 535 aa21.69■■□□□ 1.06
GCFC2-202ENST00000409857 RTF1Q92541 710 aaKnown RBP21.69■■□□□ 1.06
GCFC2-202ENST00000409857 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
GCFC2-202ENST00000409857 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
GCFC2-202ENST00000409857 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
GCFC2-202ENST00000409857 FAM182BQ5T319 152 aa21.68■■□□□ 1.06
GCFC2-202ENST00000409857 IL17REQ8NFR9 667 aa21.67■■□□□ 1.06
GCFC2-202ENST00000409857 RRP7AQ9Y3A4 280 aaKnown RBP21.67■■□□□ 1.06
GCFC2-202ENST00000409857 KAT6BQ8WYB5 2073 aa21.67■■□□□ 1.06
GCFC2-202ENST00000409857 TRIM35Q9UPQ4 493 aa21.67■■□□□ 1.06
GCFC2-202ENST00000409857 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
GCFC2-202ENST00000409857 TNS1Q9HBL0 1735 aaKnown RBP21.65■■□□□ 1.06
GCFC2-202ENST00000409857 NEUROD2Q15784 382 aa21.65■■□□□ 1.06
GCFC2-202ENST00000409857 BTAF1O14981 1849 aa21.65■■□□□ 1.06
GCFC2-202ENST00000409857 PAPPAQ13219 1627 aa21.63■■□□□ 1.05
GCFC2-202ENST00000409857 MCM10Q7L590 875 aa21.63■■□□□ 1.05
GCFC2-202ENST00000409857 SLC52A2Q9HAB3 445 aa21.63■■□□□ 1.05
GCFC2-202ENST00000409857 BCL11BQ9C0K0 894 aaPredicted RBP21.63■■□□□ 1.05
GCFC2-202ENST00000409857 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
GCFC2-202ENST00000409857 CABP4P57796 275 aa21.62■■□□□ 1.05
GCFC2-202ENST00000409857 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
GCFC2-202ENST00000409857 TMOD3Q9NYL9 352 aa21.61■■□□□ 1.05
GCFC2-202ENST00000409857 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
GCFC2-202ENST00000409857 ILDR2Q71H61 639 aa21.61■■□□□ 1.05
GCFC2-202ENST00000409857 RGPD3A6NKT7 1758 aaPredicted RBP21.61■■□□□ 1.05
GCFC2-202ENST00000409857 RGPD4Q7Z3J3 1758 aa21.61■■□□□ 1.05
GCFC2-202ENST00000409857 TEFQ10587 303 aa21.6■■□□□ 1.05
GCFC2-202ENST00000409857 WWC1Q8IX03 1113 aa21.6■■□□□ 1.05
GCFC2-202ENST00000409857 EP400Q96L91 3159 aa21.6■■□□□ 1.05
GCFC2-202ENST00000409857 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
GCFC2-202ENST00000409857 KDM3BQ7LBC6 1761 aa21.6■■□□□ 1.05
GCFC2-202ENST00000409857 KCNQ2O43526 872 aa21.59■■□□□ 1.05
GCFC2-202ENST00000409857 DUSP27Q5VZP5 1158 aa21.59■■□□□ 1.05
GCFC2-202ENST00000409857 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
GCFC2-202ENST00000409857 PIGBQ92521 554 aa21.58■■□□□ 1.05
GCFC2-202ENST00000409857 UBR2Q8IWV8 1755 aa21.58■■□□□ 1.05
GCFC2-202ENST00000409857 KDM2BQ8NHM5 1336 aa21.58■■□□□ 1.04
GCFC2-202ENST00000409857 ZNF521Q96K83 1311 aa21.58■■□□□ 1.04
GCFC2-202ENST00000409857 TRIM37O94972 964 aa21.58■■□□□ 1.04
GCFC2-202ENST00000409857 CCDC125Q86Z20 511 aa21.58■■□□□ 1.04
GCFC2-202ENST00000409857 SYTL4Q96C24 671 aaPredicted RBP21.58■■□□□ 1.04
GCFC2-202ENST00000409857 BABAM1Q9NWV8 329 aa21.58■■□□□ 1.04
GCFC2-202ENST00000409857 LY75O60449 1722 aa21.57■■□□□ 1.04
GCFC2-202ENST00000409857 TAF7Q15545 349 aaPredicted RBP21.57■■□□□ 1.04
GCFC2-202ENST00000409857 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
GCFC2-202ENST00000409857 THUMPD2Q9BTF0 503 aaKnown RBP21.57■■□□□ 1.04
GCFC2-202ENST00000409857 IL16Q14005 1332 aa21.56■■□□□ 1.04
GCFC2-202ENST00000409857 SLC4A3P48751 1232 aa21.56■■□□□ 1.04
GCFC2-202ENST00000409857 ZNF831Q5JPB2 1677 aa21.56■■□□□ 1.04
GCFC2-202ENST00000409857 PTF1AQ7RTS3 328 aa21.55■■□□□ 1.04
GCFC2-202ENST00000409857 SMARCC1Q92922 1105 aaPredicted RBP21.53■■□□□ 1.04
GCFC2-202ENST00000409857 IFT57Q9NWB7 429 aa21.53■■□□□ 1.04
GCFC2-202ENST00000409857 BTBD11A6QL63 1104 aa21.53■■□□□ 1.04
GCFC2-202ENST00000409857 IL27Q8NEV9 243 aa21.53■■□□□ 1.04
GCFC2-202ENST00000409857 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
GCFC2-202ENST00000409857 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
GCFC2-202ENST00000409857 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
GCFC2-202ENST00000409857 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
GCFC2-202ENST00000409857 ATG3Q9NT62 314 aa21.52■■□□□ 1.03
GCFC2-202ENST00000409857 CHL1O00533 1208 aa21.51■■□□□ 1.03
GCFC2-202ENST00000409857 GNAI1P63096 354 aa21.51■■□□□ 1.03
GCFC2-202ENST00000409857 PLSCR1O15162 318 aa21.51■■□□□ 1.03
GCFC2-202ENST00000409857 CENPQQ7L2Z9 268 aaPredicted RBP21.51■■□□□ 1.03
GCFC2-202ENST00000409857 KCPQ6ZWJ8 1503 aa21.51■■□□□ 1.03
GCFC2-202ENST00000409857 DDRGK1Q96HY6 314 aa21.5■■□□□ 1.03
GCFC2-202ENST00000409857 SF3B2Q13435 895 aaKnown RBP21.5■■□□□ 1.03
GCFC2-202ENST00000409857 ZNF790Q6PG37 636 aa21.5■■□□□ 1.03
GCFC2-202ENST00000409857 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
GCFC2-202ENST00000409857 PALLDQ8WX93 1383 aa21.49■■□□□ 1.03
GCFC2-202ENST00000409857 APBA3O96018 575 aa21.49■■□□□ 1.03
GCFC2-202ENST00000409857 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
GCFC2-202ENST00000409857 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
GCFC2-202ENST00000409857 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
GCFC2-202ENST00000409857 TSPYL4Q9UJ04 414 aa21.48■■□□□ 1.03
GCFC2-202ENST00000409857 SLFN5Q08AF3 891 aa21.47■■□□□ 1.03
GCFC2-202ENST00000409857 RREB1Q92766 1687 aa21.47■■□□□ 1.03
GCFC2-202ENST00000409857 SLC39A6Q13433 755 aa21.46■■□□□ 1.03
GCFC2-202ENST00000409857 C8orf34Q49A92 452 aa21.46■■□□□ 1.03
GCFC2-202ENST00000409857 BAG6P46379 1132 aa21.46■■□□□ 1.03
GCFC2-202ENST00000409857 RGS3P49796 1198 aa21.46■■□□□ 1.03
GCFC2-202ENST00000409857 TAF1LQ8IZX4 1826 aa21.45■■□□□ 1.02
GCFC2-202ENST00000409857 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
GCFC2-202ENST00000409857 TJP1Q07157 1748 aa21.45■■□□□ 1.02
GCFC2-202ENST00000409857 RTN4Q9NQC3 1192 aaKnown RBP21.45■■□□□ 1.02
GCFC2-202ENST00000409857 MBIPQ9NS73 344 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms