RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 TXNRD1Q16881 649 aa19.54■□□□□ 0.72
SUMO1-207ENST00000409498 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
SUMO1-207ENST00000409498 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
SUMO1-207ENST00000409498 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
SUMO1-207ENST00000409498 CCDC146Q8IYE0 955 aa19.53■□□□□ 0.72
SUMO1-207ENST00000409498 ATG3Q9NT62 314 aa19.53■□□□□ 0.72
SUMO1-207ENST00000409498 NUP188Q5SRE5 1749 aa19.52■□□□□ 0.72
SUMO1-207ENST00000409498 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
SUMO1-207ENST00000409498 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
SUMO1-207ENST00000409498 ASAP1Q9ULH1 1129 aa19.51■□□□□ 0.71
SUMO1-207ENST00000409498 PALLDQ8WX93 1383 aa19.51■□□□□ 0.71
SUMO1-207ENST00000409498 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
SUMO1-207ENST00000409498 PAPPAQ13219 1627 aa19.51■□□□□ 0.71
SUMO1-207ENST00000409498 RIPK4P57078 832 aa19.5■□□□□ 0.71
SUMO1-207ENST00000409498 HMGB2P26583 209 aaKnown RBP19.49■□□□□ 0.71
SUMO1-207ENST00000409498 LMOD3Q0VAK6 560 aa19.49■□□□□ 0.71
SUMO1-207ENST00000409498 TEFQ10587 303 aa19.49■□□□□ 0.71
SUMO1-207ENST00000409498 MCM10Q7L590 875 aa19.49■□□□□ 0.71
SUMO1-207ENST00000409498 MIER1Q8N108 512 aa19.48■□□□□ 0.71
SUMO1-207ENST00000409498 LRRC4BQ9NT99 713 aa19.48■□□□□ 0.71
SUMO1-207ENST00000409498 APAF1O14727 1248 aa19.47■□□□□ 0.71
SUMO1-207ENST00000409498 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
SUMO1-207ENST00000409498 TRIM35Q9UPQ4 493 aa19.47■□□□□ 0.71
SUMO1-207ENST00000409498 LOC102724428A0A0B4J2F2 783 aa19.46■□□□□ 0.71
SUMO1-207ENST00000409498 SIK1P57059 783 aa19.46■□□□□ 0.71
SUMO1-207ENST00000409498 CICQ96RK0 1608 aaPredicted RBP19.46■□□□□ 0.71
SUMO1-207ENST00000409498 UBR2Q8IWV8 1755 aa19.45■□□□□ 0.7
SUMO1-207ENST00000409498 CCNL1Q9UK58 526 aaPredicted RBP19.45■□□□□ 0.7
SUMO1-207ENST00000409498 TAF1LQ8IZX4 1826 aa19.44■□□□□ 0.7
SUMO1-207ENST00000409498 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
SUMO1-207ENST00000409498 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
SUMO1-207ENST00000409498 FAM9BQ8IZU0 186 aa19.44■□□□□ 0.7
SUMO1-207ENST00000409498 BABAM1Q9NWV8 329 aa19.44■□□□□ 0.7
SUMO1-207ENST00000409498 RRP7AQ9Y3A4 280 aaKnown RBP19.44■□□□□ 0.7
SUMO1-207ENST00000409498 KCPQ6ZWJ8 1503 aa19.43■□□□□ 0.7
SUMO1-207ENST00000409498 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
SUMO1-207ENST00000409498 ZNF790Q6PG37 636 aa19.43■□□□□ 0.7
SUMO1-207ENST00000409498 SLC4A9Q96Q91 983 aa19.43■□□□□ 0.7
SUMO1-207ENST00000409498 BTBD11A6QL63 1104 aa19.42■□□□□ 0.7
SUMO1-207ENST00000409498 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
SUMO1-207ENST00000409498 VSIG10Q8N0Z9 540 aa19.42■□□□□ 0.7
SUMO1-207ENST00000409498 C5P01031 1676 aa19.41■□□□□ 0.7
SUMO1-207ENST00000409498 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
SUMO1-207ENST00000409498 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
SUMO1-207ENST00000409498 AKT1S1Q96B36 256 aa19.41■□□□□ 0.7
SUMO1-207ENST00000409498 ATP6V1AP38606 617 aa19.4■□□□□ 0.7
SUMO1-207ENST00000409498 SLC15A2Q16348 729 aa19.4■□□□□ 0.7
SUMO1-207ENST00000409498 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
SUMO1-207ENST00000409498 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.7
SUMO1-207ENST00000409498 KCNQ4P56696 695 aa19.39■□□□□ 0.69
SUMO1-207ENST00000409498 ITPK1Q13572 414 aa19.39■□□□□ 0.69
SUMO1-207ENST00000409498 TTC5Q8N0Z6 440 aa19.39■□□□□ 0.69
SUMO1-207ENST00000409498 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
SUMO1-207ENST00000409498 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-207ENST00000409498 COL5A3P25940 1745 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-207ENST00000409498 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
SUMO1-207ENST00000409498 TJP1Q07157 1748 aa19.38■□□□□ 0.69
SUMO1-207ENST00000409498 QSER1Q2KHR3 1735 aa19.38■□□□□ 0.69
SUMO1-207ENST00000409498 STK32BQ9NY57 414 aa19.38■□□□□ 0.69
SUMO1-207ENST00000409498 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
SUMO1-207ENST00000409498 HEG1Q9ULI3 1381 aa19.37■□□□□ 0.69
SUMO1-207ENST00000409498 KCNQ3O43525 872 aa19.37■□□□□ 0.69
SUMO1-207ENST00000409498 LINC00116Q8NCU8 138 aa19.37■□□□□ 0.69
SUMO1-207ENST00000409498 ZNF496Q96IT1 587 aaPredicted RBP19.37■□□□□ 0.69
SUMO1-207ENST00000409498 CHL1O00533 1208 aa19.36■□□□□ 0.69
SUMO1-207ENST00000409498 ZNF827Q17R98 1081 aa19.36■□□□□ 0.69
SUMO1-207ENST00000409498 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
SUMO1-207ENST00000409498 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
SUMO1-207ENST00000409498 CNTNAP4Q9C0A0 1308 aa19.35■□□□□ 0.69
SUMO1-207ENST00000409498 ZNF853P0CG23 659 aa19.35■□□□□ 0.69
SUMO1-207ENST00000409498 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
SUMO1-207ENST00000409498 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
SUMO1-207ENST00000409498 CFAP44Q96MT7 982 aa19.35■□□□□ 0.69
SUMO1-207ENST00000409498 TEX13AQ9BXU3 409 aaPredicted RBP19.35■□□□□ 0.69
SUMO1-207ENST00000409498 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.68
SUMO1-207ENST00000409498 R3HDM1Q15032 1099 aaKnown RBP19.33■□□□□ 0.68
SUMO1-207ENST00000409498 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
SUMO1-207ENST00000409498 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
SUMO1-207ENST00000409498 DNAJC10Q8IXB1 793 aa19.32■□□□□ 0.68
SUMO1-207ENST00000409498 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
SUMO1-207ENST00000409498 TSPYL4Q9UJ04 414 aa19.32■□□□□ 0.68
SUMO1-207ENST00000409498 UBR3Q6ZT12 1888 aa19.32■□□□□ 0.68
SUMO1-207ENST00000409498 TUBGCP6Q96RT7 1819 aa19.32■□□□□ 0.68
SUMO1-207ENST00000409498 IL16Q14005 1332 aa19.31■□□□□ 0.68
SUMO1-207ENST00000409498 SNRPA1P09661 255 aaKnown RBP19.31■□□□□ 0.68
SUMO1-207ENST00000409498 CYP19A1P11511 503 aaPredicted RBP19.31■□□□□ 0.68
SUMO1-207ENST00000409498 WDR63Q8IWG1 891 aa19.31■□□□□ 0.68
SUMO1-207ENST00000409498 CASZ1Q86V15 1759 aa19.3■□□□□ 0.68
SUMO1-207ENST00000409498 GNAI1P63096 354 aa19.3■□□□□ 0.68
SUMO1-207ENST00000409498 FLAD1Q8NFF5 587 aa19.3■□□□□ 0.68
SUMO1-207ENST00000409498 PNPLA7Q6ZV29 1317 aa19.29■□□□□ 0.68
SUMO1-207ENST00000409498 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
SUMO1-207ENST00000409498 PSDA5PKW4 1024 aaPredicted RBP19.29■□□□□ 0.68
SUMO1-207ENST00000409498 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
SUMO1-207ENST00000409498 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
SUMO1-207ENST00000409498 SSFA2P28290 1259 aa19.29■□□□□ 0.68
SUMO1-207ENST00000409498 INTS5Q6P9B9 1019 aaKnown RBP19.29■□□□□ 0.68
SUMO1-207ENST00000409498 AK7Q96M32 723 aa19.29■□□□□ 0.68
SUMO1-207ENST00000409498 TFCP2L1Q9NZI6 479 aa19.29■□□□□ 0.68
SUMO1-207ENST00000409498 STARD3NLO95772 234 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms