RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 THUMPD2Q9BTF0 503 aaKnown RBP22.12■■□□□ 1.13
HMGA1P7-201ENST00000406908 TRIM35Q9UPQ4 493 aa22.12■■□□□ 1.13
HMGA1P7-201ENST00000406908 BTAF1O14981 1849 aa22.11■■□□□ 1.13
HMGA1P7-201ENST00000406908 ASAP1Q9ULH1 1129 aa22.11■■□□□ 1.13
HMGA1P7-201ENST00000406908 TEFQ10587 303 aa22.1■■□□□ 1.13
HMGA1P7-201ENST00000406908 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
HMGA1P7-201ENST00000406908 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
HMGA1P7-201ENST00000406908 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
HMGA1P7-201ENST00000406908 LMOD3Q0VAK6 560 aa22.09■■□□□ 1.13
HMGA1P7-201ENST00000406908 EZH2Q15910 746 aaKnown RBP22.09■■□□□ 1.13
HMGA1P7-201ENST00000406908 MRC1P22897 1456 aa22.09■■□□□ 1.13
HMGA1P7-201ENST00000406908 PROM2Q8N271 834 aa22.08■■□□□ 1.13
HMGA1P7-201ENST00000406908 SLC39A6Q13433 755 aa22.06■■□□□ 1.12
HMGA1P7-201ENST00000406908 SMARCC1Q92922 1105 aaPredicted RBP22.06■■□□□ 1.12
HMGA1P7-201ENST00000406908 TAF7Q15545 349 aaPredicted RBP22.05■■□□□ 1.12
HMGA1P7-201ENST00000406908 TXNRD1Q16881 649 aa22.05■■□□□ 1.12
HMGA1P7-201ENST00000406908 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
HMGA1P7-201ENST00000406908 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
HMGA1P7-201ENST00000406908 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
HMGA1P7-201ENST00000406908 BTBD11A6QL63 1104 aa22.03■■□□□ 1.12
HMGA1P7-201ENST00000406908 MIS18AQ9NYP9 233 aa22.03■■□□□ 1.12
HMGA1P7-201ENST00000406908 KCNQ3O43525 872 aa22.02■■□□□ 1.12
HMGA1P7-201ENST00000406908 KCNQ4P56696 695 aa22.02■■□□□ 1.12
HMGA1P7-201ENST00000406908 CCDC27Q2M243 656 aa22.02■■□□□ 1.12
HMGA1P7-201ENST00000406908 WWC1Q8IX03 1113 aa22.02■■□□□ 1.12
HMGA1P7-201ENST00000406908 SIPA1L3O60292 1781 aaPredicted RBP22.02■■□□□ 1.11
HMGA1P7-201ENST00000406908 LRRC4BQ9NT99 713 aa22.01■■□□□ 1.11
HMGA1P7-201ENST00000406908 LOC102724428A0A0B4J2F2 783 aa22■■□□□ 1.11
HMGA1P7-201ENST00000406908 PTCD1O75127 700 aaKnown RBP22■■□□□ 1.11
HMGA1P7-201ENST00000406908 SIK1P57059 783 aa22■■□□□ 1.11
HMGA1P7-201ENST00000406908 ZNF790Q6PG37 636 aa22■■□□□ 1.11
HMGA1P7-201ENST00000406908 SLC4A9Q96Q91 983 aa22■■□□□ 1.11
HMGA1P7-201ENST00000406908 RBM42Q9BTD8 480 aaKnown RBP22■■□□□ 1.11
HMGA1P7-201ENST00000406908 CCNL1Q9UK58 526 aaPredicted RBP21.99■■□□□ 1.11
HMGA1P7-201ENST00000406908 SLC27A3Q5K4L6 730 aa21.98■■□□□ 1.11
HMGA1P7-201ENST00000406908 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
HMGA1P7-201ENST00000406908 LY75O60449 1722 aa21.97■■□□□ 1.11
HMGA1P7-201ENST00000406908 RGPD3A6NKT7 1758 aaPredicted RBP21.97■■□□□ 1.11
HMGA1P7-201ENST00000406908 RGPD4Q7Z3J3 1758 aa21.97■■□□□ 1.11
HMGA1P7-201ENST00000406908 TTC5Q8N0Z6 440 aa21.97■■□□□ 1.11
HMGA1P7-201ENST00000406908 ZNF496Q96IT1 587 aaPredicted RBP21.97■■□□□ 1.11
HMGA1P7-201ENST00000406908 LAS1LQ9Y4W2 734 aaKnown RBP21.97■■□□□ 1.11
HMGA1P7-201ENST00000406908 CHL1O00533 1208 aa21.96■■□□□ 1.11
HMGA1P7-201ENST00000406908 ATP6V1AP38606 617 aa21.96■■□□□ 1.11
HMGA1P7-201ENST00000406908 PAPPAQ13219 1627 aa21.95■■□□□ 1.1
HMGA1P7-201ENST00000406908 ZNF853P0CG23 659 aa21.95■■□□□ 1.1
HMGA1P7-201ENST00000406908 ITPK1Q13572 414 aa21.95■■□□□ 1.1
HMGA1P7-201ENST00000406908 BABAM1Q9NWV8 329 aa21.95■■□□□ 1.1
HMGA1P7-201ENST00000406908 TSPYL4Q9UJ04 414 aa21.95■■□□□ 1.1
HMGA1P7-201ENST00000406908 CALD1Q05682 793 aaKnown RBP21.94■■□□□ 1.1
HMGA1P7-201ENST00000406908 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
HMGA1P7-201ENST00000406908 KCPQ6ZWJ8 1503 aa21.94■■□□□ 1.1
HMGA1P7-201ENST00000406908 WDR63Q8IWG1 891 aa21.93■■□□□ 1.1
HMGA1P7-201ENST00000406908 FMNL2Q96PY5 1086 aa21.93■■□□□ 1.1
HMGA1P7-201ENST00000406908 RREB1Q92766 1687 aa21.92■■□□□ 1.1
HMGA1P7-201ENST00000406908 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
HMGA1P7-201ENST00000406908 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
HMGA1P7-201ENST00000406908 EIF4A1P60842 406 aaKnown RBP21.91■■□□□ 1.1
HMGA1P7-201ENST00000406908 GNAI1P63096 354 aa21.91■■□□□ 1.1
HMGA1P7-201ENST00000406908 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
HMGA1P7-201ENST00000406908 VSIG10Q8N0Z9 540 aa21.91■■□□□ 1.1
HMGA1P7-201ENST00000406908 LINC00116Q8NCU8 138 aa21.91■■□□□ 1.1
HMGA1P7-201ENST00000406908 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
HMGA1P7-201ENST00000406908 KDM3BQ7LBC6 1761 aa21.9■■□□□ 1.1
HMGA1P7-201ENST00000406908 UBR2Q8IWV8 1755 aa21.9■■□□□ 1.1
HMGA1P7-201ENST00000406908 IL16Q14005 1332 aa21.9■■□□□ 1.1
HMGA1P7-201ENST00000406908 ANO8Q9HCE9 1232 aaPredicted RBP21.9■■□□□ 1.1
HMGA1P7-201ENST00000406908 MBIPQ9NS73 344 aa21.9■■□□□ 1.1
HMGA1P7-201ENST00000406908 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.1
HMGA1P7-201ENST00000406908 SPINK5Q9NQ38 1064 aaPredicted RBP21.89■■□□□ 1.09
HMGA1P7-201ENST00000406908 PRAMEF22A3QJZ6 481 aa21.88■■□□□ 1.09
HMGA1P7-201ENST00000406908 HNRNPUQ00839 825 aaKnown RBP eCLIP21.88■■□□□ 1.09
HMGA1P7-201ENST00000406908 AKT1S1Q96B36 256 aa21.88■■□□□ 1.09
HMGA1P7-201ENST00000406908 ZNF827Q17R98 1081 aa21.87■■□□□ 1.09
HMGA1P7-201ENST00000406908 NBPF14Q5TI25 921 aa21.87■■□□□ 1.09
HMGA1P7-201ENST00000406908 ZNF831Q5JPB2 1677 aa21.86■■□□□ 1.09
HMGA1P7-201ENST00000406908 GIGYF1O75420 1035 aaPredicted RBP21.86■■□□□ 1.09
HMGA1P7-201ENST00000406908 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
HMGA1P7-201ENST00000406908 KRT24Q2M2I5 525 aa21.86■■□□□ 1.09
HMGA1P7-201ENST00000406908 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
HMGA1P7-201ENST00000406908 USP16Q9Y5T5 823 aa21.86■■□□□ 1.09
HMGA1P7-201ENST00000406908 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
HMGA1P7-201ENST00000406908 CYP19A1P11511 503 aaPredicted RBP21.85■■□□□ 1.09
HMGA1P7-201ENST00000406908 HMGB2P26583 209 aaKnown RBP21.85■■□□□ 1.09
HMGA1P7-201ENST00000406908 SLC15A2Q16348 729 aa21.85■■□□□ 1.09
HMGA1P7-201ENST00000406908 STK32BQ9NY57 414 aa21.85■■□□□ 1.09
HMGA1P7-201ENST00000406908 TJP1Q07157 1748 aa21.85■■□□□ 1.09
HMGA1P7-201ENST00000406908 TEX13AQ9BXU3 409 aaPredicted RBP21.84■■□□□ 1.09
HMGA1P7-201ENST00000406908 C5P01031 1676 aa21.84■■□□□ 1.09
HMGA1P7-201ENST00000406908 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
HMGA1P7-201ENST00000406908 RC3H1Q5TC82 1133 aaKnown RBP21.83■■□□□ 1.09
HMGA1P7-201ENST00000406908 CRKLP46109 303 aaKnown RBP21.82■■□□□ 1.08
HMGA1P7-201ENST00000406908 INTS5Q6P9B9 1019 aaKnown RBP21.82■■□□□ 1.08
HMGA1P7-201ENST00000406908 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
HMGA1P7-201ENST00000406908 CDCA7LQ96GN5 454 aa21.82■■□□□ 1.08
HMGA1P7-201ENST00000406908 CNTNAP4Q9C0A0 1308 aa21.81■■□□□ 1.08
HMGA1P7-201ENST00000406908 CICQ96RK0 1608 aaPredicted RBP21.81■■□□□ 1.08
HMGA1P7-201ENST00000406908 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
HMGA1P7-201ENST00000406908 STARD3NLO95772 234 aa21.81■■□□□ 1.08
HMGA1P7-201ENST00000406908 R3HDM1Q15032 1099 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms