RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 SOGA3Q5TF21 947 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 DDX46Q7L014 1031 aaKnown RBP5.93□□□□□ -1.46
HDAC9-204ENST00000406451 NUP133Q8WUM0 1156 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 ACSBG1Q96GR2 724 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 USP5P45974 858 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 NEK4P51957 841 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 ALDH1L2Q3SY69 923 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 ZBTB3Q9H5J0 574 aa5.93□□□□□ -1.46
HDAC9-204ENST00000406451 TARBP1Q13395 1621 aaKnown RBP5.93□□□□□ -1.46
HDAC9-204ENST00000406451 SNRPA1P09661 255 aaKnown RBP5.93□□□□□ -1.46
HDAC9-204ENST00000406451 KRT18P05783 430 aaKnown RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 IL2RBP14784 551 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 KIF1BPQ96EK5 621 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 ATP6V1AP38606 617 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 TCOF1Q13428 1488 aaKnown RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 RALGAPBQ86X10 1494 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 POLR3DP05423 398 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 SASS6Q6UVJ0 657 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 CWC25Q9NXE8 425 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 RAB11FIP3O75154 756 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 RABEP1Q15276 862 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 RPAP2Q8IXW5 612 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 ZNF622Q969S3 477 aaKnown RBP eCLIP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 CHMP5Q9NZZ3 219 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 ASXL1Q8IXJ9 1541 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 SLFN5Q08AF3 891 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 TMEM57Q8N5G2 664 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 CABLES1Q8TDN4 633 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 IL1RAPL2Q9NP60 686 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 CDKL5O76039 1030 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 DEKP35659 375 aaKnown RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 OLFM4Q6UX06 510 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 CHD1LQ86WJ1 897 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 PRAG1Q86YV5 1406 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 FANCIQ9NVI1 1328 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 KCNA6P17658 529 aa5.92□□□□□ -1.46
HDAC9-204ENST00000406451 ZNF396Q96N95 335 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-204ENST00000406451 NPATQ14207 1427 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 NBPF14Q5TI25 921 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 NKTRP30414 1462 aaKnown RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 IMMTQ16891 758 aaKnown RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 INSRP06213 1382 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 MAP3K12Q12852 859 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 CT47A1Q5JQC4 288 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 SDF4Q9BRK5 362 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 PIK3R4Q99570 1358 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 JMYQ8N9B5 988 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 TBX22Q9Y458 520 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 PTPRCP08575 1304 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 POLD1P28340 1107 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 CCDC70Q6NSX1 233 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 NAT10Q9H0A0 1025 aaKnown RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 MAP3K2Q9Y2U5 619 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 KRT32Q14532 448 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 CWC27Q6UX04 472 aaKnown RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 SSH1Q8WYL5 1049 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 SETDB2Q96T68 719 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 EXOC6BQ9Y2D4 811 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 HSP90AB2PQ58FF8 381 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 YTHDC2Q9H6S0 1430 aaKnown RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 FLT4P35916 1363 aa5.91□□□□□ -1.46
HDAC9-204ENST00000406451 SETD1BQ9UPS6 1966 aaKnown RBP5.91□□□□□ -1.46
HDAC9-204ENST00000406451 GOLGA6L1Q8N7Z2 621 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 KIF1BO60333 1816 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 SAMD9Q5K651 1589 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 FLIIQ13045 1269 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 STK38Q15208 465 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 TSHZ2Q9NRE2 1034 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 KINO60870 393 aaKnown RBP5.9□□□□□ -1.46
HDAC9-204ENST00000406451 ODF2Q5BJF6 829 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 BLOC1S2Q6QNY1 142 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 GLRX3O76003 335 aaKnown RBP5.9□□□□□ -1.46
HDAC9-204ENST00000406451 CCDC152Q4G0S7 254 aa5.9□□□□□ -1.46
HDAC9-204ENST00000406451 LRRFIP2Q9Y608 721 aaKnown RBP5.9□□□□□ -1.46
HDAC9-204ENST00000406451 OFD1O75665 1012 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 STK3Q13188 491 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 NUTM1Q86Y26 1132 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 U3KPZ7 1027 aaPredicted RBP5.9□□□□□ -1.47
HDAC9-204ENST00000406451 ZNF76P36508 570 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 UBE3BQ7Z3V4 1068 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 SEC63Q9UGP8 760 aaKnown RBP5.9□□□□□ -1.47
HDAC9-204ENST00000406451 F6X3S4 739 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 MKNK2Q9HBH9 465 aa5.9□□□□□ -1.47
HDAC9-204ENST00000406451 NOL7Q9UMY1 257 aaKnown RBP5.9□□□□□ -1.47
HDAC9-204ENST00000406451 NAPBQ9H115 298 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 TFCP2L1Q9NZI6 479 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 PTPRKQ15262 1439 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 SPTY2D1Q68D10 685 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-204ENST00000406451 ATP5J2-PTCD1G3V325 749 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 MX1P20591 662 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 CCAR2Q8N163 923 aaKnown RBP5.89□□□□□ -1.47
HDAC9-204ENST00000406451 MINDY4BA8MYZ0 360 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 BTG4Q9NY30 223 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 PCDH11XQ9BZA7 1347 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 PCDH11YQ9BZA8 1340 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 CDCA7Q9BWT1 371 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-204ENST00000406451 MYO1BO43795 1136 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 ANKRD13DQ6ZTN6 518 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 WASF1Q92558 559 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 ARHGEF12Q9NZN5 1544 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms