RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 IGSF3O75054 1194 aa18.34■□□□□ 0.53
ATG4B-206ENST00000405546 SIRT1Q96EB6 747 aa18.34■□□□□ 0.53
ATG4B-206ENST00000405546 PTPRCP08575 1304 aa18.33■□□□□ 0.53
ATG4B-206ENST00000405546 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.53
ATG4B-206ENST00000405546 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.52
ATG4B-206ENST00000405546 FLIIQ13045 1269 aa18.33■□□□□ 0.52
ATG4B-206ENST00000405546 CCDC30Q5VVM6 783 aa18.33■□□□□ 0.52
ATG4B-206ENST00000405546 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
ATG4B-206ENST00000405546 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-206ENST00000405546 KCNA6P17658 529 aa18.32■□□□□ 0.52
ATG4B-206ENST00000405546 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
ATG4B-206ENST00000405546 C17orf53Q8N3J3 647 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-206ENST00000405546 ZGPATQ8N5A5 531 aaKnown RBP18.32■□□□□ 0.52
ATG4B-206ENST00000405546 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
ATG4B-206ENST00000405546 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
ATG4B-206ENST00000405546 ST18O60284 1047 aa18.32■□□□□ 0.52
ATG4B-206ENST00000405546 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-206ENST00000405546 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
ATG4B-206ENST00000405546 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
ATG4B-206ENST00000405546 RTL1A6NKG5 1358 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 REC8O95072 547 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 RABEP1Q15276 862 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.31■□□□□ 0.52
ATG4B-206ENST00000405546 ANXA1P04083 346 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 NEK4P51957 841 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 CBX1P83916 185 aa18.31■□□□□ 0.52
ATG4B-206ENST00000405546 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
ATG4B-206ENST00000405546 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
ATG4B-206ENST00000405546 LRRFIP2Q9Y608 721 aaKnown RBP18.3■□□□□ 0.52
ATG4B-206ENST00000405546 PLCB2Q00722 1185 aa18.3■□□□□ 0.52
ATG4B-206ENST00000405546 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
ATG4B-206ENST00000405546 USP6P35125 1406 aa18.29■□□□□ 0.52
ATG4B-206ENST00000405546 PSME1Q06323 249 aa18.29■□□□□ 0.52
ATG4B-206ENST00000405546 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-206ENST00000405546 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
ATG4B-206ENST00000405546 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
ATG4B-206ENST00000405546 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
ATG4B-206ENST00000405546 PNMA6EA0A0J9YXQ4 647 aa18.28■□□□□ 0.52
ATG4B-206ENST00000405546 ERC2O15083 957 aa18.28■□□□□ 0.52
ATG4B-206ENST00000405546 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-206ENST00000405546 PDE1AP54750 535 aa18.28■□□□□ 0.52
ATG4B-206ENST00000405546 FLT4P35916 1363 aa18.28■□□□□ 0.52
ATG4B-206ENST00000405546 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
ATG4B-206ENST00000405546 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-206ENST00000405546 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
ATG4B-206ENST00000405546 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.52
ATG4B-206ENST00000405546 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.52
ATG4B-206ENST00000405546 GNAI3P08754 354 aa18.27■□□□□ 0.52
ATG4B-206ENST00000405546 HOXC9P31274 260 aa18.27■□□□□ 0.51
ATG4B-206ENST00000405546 DTNBO60941 627 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 TAF7Q15545 349 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-206ENST00000405546 IL17REQ8NFR9 667 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 RIMBP3CA6NJZ7 1639 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 TTC21AQ8NDW8 1320 aa18.26■□□□□ 0.51
ATG4B-206ENST00000405546 TEFQ10587 303 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 GDPD2Q9HCC8 539 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 AGLP35573 1532 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 ADAMTS13Q76LX8 1427 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
ATG4B-206ENST00000405546 NOL7Q9UMY1 257 aaKnown RBP18.25■□□□□ 0.51
ATG4B-206ENST00000405546 SPDYE4A6NLX3 237 aa18.24■□□□□ 0.51
ATG4B-206ENST00000405546 TBX22Q9Y458 520 aa18.24■□□□□ 0.51
ATG4B-206ENST00000405546 KIAA0232Q92628 1395 aa18.24■□□□□ 0.51
ATG4B-206ENST00000405546 MX1P20591 662 aa18.24■□□□□ 0.51
ATG4B-206ENST00000405546 UPF3BQ9BZI7 483 aaKnown RBP18.24■□□□□ 0.51
ATG4B-206ENST00000405546 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
ATG4B-206ENST00000405546 MPRIPQ6WCQ1 1025 aa18.24■□□□□ 0.51
ATG4B-206ENST00000405546 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
ATG4B-206ENST00000405546 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
ATG4B-206ENST00000405546 MCCP23508 829 aa18.23■□□□□ 0.51
ATG4B-206ENST00000405546 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
ATG4B-206ENST00000405546 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
ATG4B-206ENST00000405546 SRGAP3O43295 1099 aa18.22■□□□□ 0.51
ATG4B-206ENST00000405546 PHF8Q9UPP1 1060 aa18.22■□□□□ 0.51
ATG4B-206ENST00000405546 NCOA3Q9Y6Q9 1424 aa18.21■□□□□ 0.51
ATG4B-206ENST00000405546 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.51
ATG4B-206ENST00000405546 NUCB2P80303 420 aa18.21■□□□□ 0.51
ATG4B-206ENST00000405546 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
ATG4B-206ENST00000405546 LARP6Q9BRS8 491 aaKnown RBP18.2■□□□□ 0.5
ATG4B-206ENST00000405546 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
ATG4B-206ENST00000405546 SRCIN1Q9C0H9 1055 aa18.2■□□□□ 0.5
ATG4B-206ENST00000405546 CRB1P82279 1406 aa18.2■□□□□ 0.5
ATG4B-206ENST00000405546 KCNQ3O43525 872 aa18.2■□□□□ 0.5
ATG4B-206ENST00000405546 ZNF530Q6P9A1 599 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-206ENST00000405546 OVOS2A0A0J9YW53 1432 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 OVOS2Q6IE36 1432 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 PI4KAP2A4QPH2 592 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 PI4KAP1Q8N8J0 262 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
ATG4B-206ENST00000405546 ATP10DQ9P241 1426 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
ATG4B-206ENST00000405546 TTC12Q9H892 705 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms