RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AMPHP49418 695 aa24.5■■□□□ 1.51
CCDC47-202ENST00000403162 GAS2L3Q86XJ1 694 aa24.5■■□□□ 1.51
CCDC47-202ENST00000403162 INTS3Q68E01 1043 aaKnown RBP24.5■■□□□ 1.51
CCDC47-202ENST00000403162 SLIT3O75094 1523 aa24.5■■□□□ 1.51
CCDC47-202ENST00000403162 RABEP1Q15276 862 aa24.49■■□□□ 1.51
CCDC47-202ENST00000403162 NFAT5O94916 1531 aa24.49■■□□□ 1.51
CCDC47-202ENST00000403162 TTC22Q5TAA0 569 aa24.49■■□□□ 1.51
CCDC47-202ENST00000403162 PEAK1Q9H792 1746 aa24.48■■□□□ 1.51
CCDC47-202ENST00000403162 ZBTB7CA1YPR0 619 aa24.48■■□□□ 1.51
CCDC47-202ENST00000403162 CABLES1Q8TDN4 633 aa24.48■■□□□ 1.51
CCDC47-202ENST00000403162 FOXD4L1Q9NU39 408 aa24.48■■□□□ 1.51
CCDC47-202ENST00000403162 MED1Q15648 1581 aaPredicted RBP24.48■■□□□ 1.51
CCDC47-202ENST00000403162 GOLGA6L22H0YM25 854 aa24.47■■□□□ 1.51
CCDC47-202ENST00000403162 ATP10DQ9P241 1426 aa24.47■■□□□ 1.51
CCDC47-202ENST00000403162 IBTKQ9P2D0 1353 aaPredicted RBP24.47■■□□□ 1.51
CCDC47-202ENST00000403162 SSFA2P28290 1259 aa24.47■■□□□ 1.51
CCDC47-202ENST00000403162 FLT4P35916 1363 aa24.47■■□□□ 1.51
CCDC47-202ENST00000403162 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
CCDC47-202ENST00000403162 HSP90AB2PQ58FF8 381 aa24.46■■□□□ 1.51
CCDC47-202ENST00000403162 ANKRD44Q8N8A2 993 aa24.46■■□□□ 1.51
CCDC47-202ENST00000403162 RGS12O14924 1447 aa24.46■■□□□ 1.51
CCDC47-202ENST00000403162 ESPNB1AK53 854 aa24.46■■□□□ 1.51
CCDC47-202ENST00000403162 HAP1P54257 671 aaPredicted RBP24.46■■□□□ 1.51
CCDC47-202ENST00000403162 FAM83GA6ND36 823 aa24.45■■□□□ 1.5
CCDC47-202ENST00000403162 RPAP2Q8IXW5 612 aaPredicted RBP24.44■■□□□ 1.5
CCDC47-202ENST00000403162 HOXC9P31274 260 aa24.43■■□□□ 1.5
CCDC47-202ENST00000403162 KLHL40Q2TBA0 621 aa24.43■■□□□ 1.5
CCDC47-202ENST00000403162 UBE2Q2Q8WVN8 375 aa24.43■■□□□ 1.5
CCDC47-202ENST00000403162 LRRC59Q96AG4 307 aaKnown RBP24.43■■□□□ 1.5
CCDC47-202ENST00000403162 USP26Q9BXU7 913 aa24.43■■□□□ 1.5
CCDC47-202ENST00000403162 LTN1O94822 1766 aa24.43■■□□□ 1.5
CCDC47-202ENST00000403162 BAG4O95429 457 aaKnown RBP24.43■■□□□ 1.5
CCDC47-202ENST00000403162 ZC3H6P61129 1189 aaKnown RBP24.43■■□□□ 1.5
CCDC47-202ENST00000403162 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
CCDC47-202ENST00000403162 PHRF1Q9P1Y6 1649 aaKnown RBP24.42■■□□□ 1.5
CCDC47-202ENST00000403162 EIF4A2Q14240 407 aaKnown RBP24.42■■□□□ 1.5
CCDC47-202ENST00000403162 KIAA0232Q92628 1395 aa24.41■■□□□ 1.5
CCDC47-202ENST00000403162 DCTN1Q14203 1278 aa24.41■■□□□ 1.5
CCDC47-202ENST00000403162 TRIM44Q96DX7 344 aaPredicted RBP24.41■■□□□ 1.5
CCDC47-202ENST00000403162 ERBB4Q15303 1308 aa24.41■■□□□ 1.5
CCDC47-202ENST00000403162 RTL1A6NKG5 1358 aa24.41■■□□□ 1.5
CCDC47-202ENST00000403162 NAP1L5Q96NT1 182 aaPredicted RBP24.4■■□□□ 1.5
CCDC47-202ENST00000403162 PHLPP1O60346 1717 aa24.4■■□□□ 1.5
CCDC47-202ENST00000403162 NUCB2P80303 420 aa24.4■■□□□ 1.5
CCDC47-202ENST00000403162 CEP85Q6P2H3 762 aa24.4■■□□□ 1.5
CCDC47-202ENST00000403162 IP6K1Q92551 441 aa24.4■■□□□ 1.5
CCDC47-202ENST00000403162 CYP2E1P05181 493 aaPredicted RBP24.39■■□□□ 1.49
CCDC47-202ENST00000403162 PTPRCP08575 1304 aa24.39■■□□□ 1.49
CCDC47-202ENST00000403162 CRYBG1Q9Y4K1 1723 aa24.39■■□□□ 1.49
CCDC47-202ENST00000403162 AK9Q5TCS8 1911 aa24.38■■□□□ 1.49
CCDC47-202ENST00000403162 CHL1O00533 1208 aa24.38■■□□□ 1.49
CCDC47-202ENST00000403162 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
CCDC47-202ENST00000403162 CCDC173Q0VFZ6 552 aa24.37■■□□□ 1.49
CCDC47-202ENST00000403162 CASC1Q6TDU7 716 aa24.37■■□□□ 1.49
CCDC47-202ENST00000403162 LTV1Q96GA3 475 aaPredicted RBP24.37■■□□□ 1.49
CCDC47-202ENST00000403162 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
CCDC47-202ENST00000403162 PPP1R9BQ96SB3 815 aa24.36■■□□□ 1.49
CCDC47-202ENST00000403162 SDSP20132 328 aa24.36■■□□□ 1.49
CCDC47-202ENST00000403162 CWC22Q9HCG8 908 aaKnown RBP24.36■■□□□ 1.49
CCDC47-202ENST00000403162 OTUD7AQ8TE49 926 aaPredicted RBP24.35■■□□□ 1.49
CCDC47-202ENST00000403162 COL16A1Q07092 1604 aaPredicted RBP24.35■■□□□ 1.49
CCDC47-202ENST00000403162 NASPP49321 788 aaPredicted RBP24.33■■□□□ 1.49
CCDC47-202ENST00000403162 RGPD1P0DJD0 1748 aa24.33■■□□□ 1.49
CCDC47-202ENST00000403162 ZNF445P59923 1031 aa24.33■■□□□ 1.48
CCDC47-202ENST00000403162 AEBP1Q8IUX7 1158 aa24.33■■□□□ 1.48
CCDC47-202ENST00000403162 ST18O60284 1047 aa24.32■■□□□ 1.48
CCDC47-202ENST00000403162 CHRNA2Q15822 529 aa24.32■■□□□ 1.48
CCDC47-202ENST00000403162 KRT24Q2M2I5 525 aa24.32■■□□□ 1.48
CCDC47-202ENST00000403162 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
CCDC47-202ENST00000403162 AXIN2Q9Y2T1 843 aa24.32■■□□□ 1.48
CCDC47-202ENST00000403162 CPDO75976 1380 aa24.31■■□□□ 1.48
CCDC47-202ENST00000403162 ABCA3Q99758 1704 aa24.31■■□□□ 1.48
CCDC47-202ENST00000403162 REC8O95072 547 aa24.31■■□□□ 1.48
CCDC47-202ENST00000403162 MEIS3Q99687 375 aa24.3■■□□□ 1.48
CCDC47-202ENST00000403162 MCTP1Q6DN14 999 aa24.3■■□□□ 1.48
CCDC47-202ENST00000403162 PRDM11Q9NQV5 511 aa24.3■■□□□ 1.48
CCDC47-202ENST00000403162 LMBRD1Q9NUN5 540 aa24.3■■□□□ 1.48
CCDC47-202ENST00000403162 EYA1Q99502 592 aa24.29■■□□□ 1.48
CCDC47-202ENST00000403162 SMARCA5O60264 1052 aaPredicted RBP24.29■■□□□ 1.48
CCDC47-202ENST00000403162 ANP32BQ92688 251 aaKnown RBP24.29■■□□□ 1.48
CCDC47-202ENST00000403162 OSBPL3Q9H4L5 887 aa24.29■■□□□ 1.48
CCDC47-202ENST00000403162 CRB1P82279 1406 aa24.28■■□□□ 1.48
CCDC47-202ENST00000403162 HMMRO75330 724 aa24.27■■□□□ 1.48
CCDC47-202ENST00000403162 MCM10Q7L590 875 aa24.27■■□□□ 1.48
CCDC47-202ENST00000403162 ANKRD24Q8TF21 1146 aa24.27■■□□□ 1.48
CCDC47-202ENST00000403162 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
CCDC47-202ENST00000403162 ERC2O15083 957 aa24.26■■□□□ 1.47
CCDC47-202ENST00000403162 IGSF1Q8N6C5 1336 aa24.26■■□□□ 1.47
CCDC47-202ENST00000403162 RGPD5Q99666 1765 aa24.25■■□□□ 1.47
CCDC47-202ENST00000403162 COL18A1P39060 1754 aa24.25■■□□□ 1.47
CCDC47-202ENST00000403162 PKP1Q13835 747 aa24.25■■□□□ 1.47
CCDC47-202ENST00000403162 ZSCAN23Q3MJ62 389 aa24.25■■□□□ 1.47
CCDC47-202ENST00000403162 ZSCAN30Q86W11 494 aa24.23■■□□□ 1.47
CCDC47-202ENST00000403162 TUBGCP6Q96RT7 1819 aa24.23■■□□□ 1.47
CCDC47-202ENST00000403162 SLC4A2P04920 1241 aa24.23■■□□□ 1.47
CCDC47-202ENST00000403162 CAVIN1Q6NZI2 390 aaKnown RBP24.23■■□□□ 1.47
CCDC47-202ENST00000403162 ZGPATQ8N5A5 531 aaKnown RBP24.23■■□□□ 1.47
CCDC47-202ENST00000403162 USHBP1Q8N6Y0 703 aa24.23■■□□□ 1.47
CCDC47-202ENST00000403162 ABCC6O95255 1503 aa24.23■■□□□ 1.47
CCDC47-202ENST00000403162 APBB1O00213 710 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms