RNA–Protein interactions for RNA: ENST00000402718.4

COMMD5-202, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD5, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-202ENST00000402718 MRC1P22897 1456 aa22.1■■□□□ 1.13
COMMD5-202ENST00000402718 HMGB2P26583 209 aaKnown RBP22.09■■□□□ 1.13
COMMD5-202ENST00000402718 NFE2L2Q16236 605 aa22.09■■□□□ 1.13
COMMD5-202ENST00000402718 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
COMMD5-202ENST00000402718 PNISRQ8TF01 805 aaKnown RBP22.09■■□□□ 1.13
COMMD5-202ENST00000402718 STK32BQ9NY57 414 aa22.09■■□□□ 1.13
COMMD5-202ENST00000402718 PSDA5PKW4 1024 aaPredicted RBP22.08■■□□□ 1.13
COMMD5-202ENST00000402718 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.13
COMMD5-202ENST00000402718 KCNQ4P56696 695 aa22.08■■□□□ 1.13
COMMD5-202ENST00000402718 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.13
COMMD5-202ENST00000402718 ANO8Q9HCE9 1232 aaPredicted RBP22.08■■□□□ 1.13
COMMD5-202ENST00000402718 SCN11AQ9UI33 1791 aa22.08■■□□□ 1.13
COMMD5-202ENST00000402718 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.13
COMMD5-202ENST00000402718 LY75O60449 1722 aa22.08■■□□□ 1.12
COMMD5-202ENST00000402718 LOC102724428A0A0B4J2F2 783 aa22.07■■□□□ 1.12
COMMD5-202ENST00000402718 SIK1P57059 783 aa22.07■■□□□ 1.12
COMMD5-202ENST00000402718 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
COMMD5-202ENST00000402718 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
COMMD5-202ENST00000402718 MCM10Q7L590 875 aa22.06■■□□□ 1.12
COMMD5-202ENST00000402718 RBM42Q9BTD8 480 aaKnown RBP22.06■■□□□ 1.12
COMMD5-202ENST00000402718 SLC15A2Q16348 729 aa22.05■■□□□ 1.12
COMMD5-202ENST00000402718 PAPPAQ13219 1627 aa22.04■■□□□ 1.12
COMMD5-202ENST00000402718 ATP6V1AP38606 617 aa22.04■■□□□ 1.12
COMMD5-202ENST00000402718 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
COMMD5-202ENST00000402718 PTCD1O75127 700 aaKnown RBP22.03■■□□□ 1.12
COMMD5-202ENST00000402718 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
COMMD5-202ENST00000402718 RIPK4P57078 832 aa22.03■■□□□ 1.12
COMMD5-202ENST00000402718 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
COMMD5-202ENST00000402718 SLC39A6Q13433 755 aa22.02■■□□□ 1.12
COMMD5-202ENST00000402718 ZNF827Q17R98 1081 aa22.02■■□□□ 1.12
COMMD5-202ENST00000402718 TTC5Q8N0Z6 440 aa22.02■■□□□ 1.12
COMMD5-202ENST00000402718 AKT1S1Q96B36 256 aa22.01■■□□□ 1.11
COMMD5-202ENST00000402718 NEUROD2Q15784 382 aa22■■□□□ 1.11
COMMD5-202ENST00000402718 TFCP2L1Q9NZI6 479 aa22■■□□□ 1.11
COMMD5-202ENST00000402718 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
COMMD5-202ENST00000402718 BTBD11A6QL63 1104 aa21.99■■□□□ 1.11
COMMD5-202ENST00000402718 ITPK1Q13572 414 aa21.99■■□□□ 1.11
COMMD5-202ENST00000402718 ZNF790Q6PG37 636 aa21.98■■□□□ 1.11
COMMD5-202ENST00000402718 LINC00116Q8NCU8 138 aa21.98■■□□□ 1.11
COMMD5-202ENST00000402718 AK7Q96M32 723 aa21.98■■□□□ 1.11
COMMD5-202ENST00000402718 SLC4A9Q96Q91 983 aa21.98■■□□□ 1.11
COMMD5-202ENST00000402718 C5P01031 1676 aa21.97■■□□□ 1.11
COMMD5-202ENST00000402718 TAF7Q15545 349 aaPredicted RBP21.96■■□□□ 1.11
COMMD5-202ENST00000402718 THUMPD2Q9BTF0 503 aaKnown RBP21.96■■□□□ 1.11
COMMD5-202ENST00000402718 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
COMMD5-202ENST00000402718 APAF1O14727 1248 aa21.95■■□□□ 1.1
COMMD5-202ENST00000402718 KCPQ6ZWJ8 1503 aa21.95■■□□□ 1.1
COMMD5-202ENST00000402718 ZNF831Q5JPB2 1677 aa21.94■■□□□ 1.1
COMMD5-202ENST00000402718 C4BP0C0L5 1744 aa21.93■■□□□ 1.1
COMMD5-202ENST00000402718 FAM9BQ8IZU0 186 aa21.93■■□□□ 1.1
COMMD5-202ENST00000402718 VSIG10Q8N0Z9 540 aa21.93■■□□□ 1.1
COMMD5-202ENST00000402718 FMNL2Q96PY5 1086 aa21.93■■□□□ 1.1
COMMD5-202ENST00000402718 SIPA1L3O60292 1781 aaPredicted RBP21.93■■□□□ 1.1
COMMD5-202ENST00000402718 ZNF496Q96IT1 587 aaPredicted RBP21.92■■□□□ 1.1
COMMD5-202ENST00000402718 DLG5Q8TDM6 1919 aa21.92■■□□□ 1.1
COMMD5-202ENST00000402718 PNPLA7Q6ZV29 1317 aa21.92■■□□□ 1.1
COMMD5-202ENST00000402718 GNPATO15228 680 aa21.91■■□□□ 1.1
COMMD5-202ENST00000402718 DNAJC10Q8IXB1 793 aa21.91■■□□□ 1.1
COMMD5-202ENST00000402718 FLAD1Q8NFF5 587 aa21.91■■□□□ 1.1
COMMD5-202ENST00000402718 PDGFDQ9GZP0 370 aaPredicted RBP21.91■■□□□ 1.1
COMMD5-202ENST00000402718 TRIM35Q9UPQ4 493 aa21.91■■□□□ 1.1
COMMD5-202ENST00000402718 CNTNAP4Q9C0A0 1308 aa21.91■■□□□ 1.1
COMMD5-202ENST00000402718 HEG1Q9ULI3 1381 aa21.91■■□□□ 1.1
COMMD5-202ENST00000402718 TAF1LQ8IZX4 1826 aa21.9■■□□□ 1.1
COMMD5-202ENST00000402718 KCNQ3O43525 872 aa21.9■■□□□ 1.1
COMMD5-202ENST00000402718 RC3H1Q5TC82 1133 aaKnown RBP21.9■■□□□ 1.1
COMMD5-202ENST00000402718 MSH5O43196 834 aa21.89■■□□□ 1.1
COMMD5-202ENST00000402718 MIS18AQ9NYP9 233 aa21.89■■□□□ 1.1
COMMD5-202ENST00000402718 UBR2Q8IWV8 1755 aa21.88■■□□□ 1.09
COMMD5-202ENST00000402718 PHF14O94880 888 aa21.88■■□□□ 1.09
COMMD5-202ENST00000402718 CRKLP46109 303 aaKnown RBP21.88■■□□□ 1.09
COMMD5-202ENST00000402718 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
COMMD5-202ENST00000402718 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
COMMD5-202ENST00000402718 ZBTB7AO95365 584 aa21.87■■□□□ 1.09
COMMD5-202ENST00000402718 STARD3NLO95772 234 aa21.87■■□□□ 1.09
COMMD5-202ENST00000402718 SSFA2P28290 1259 aa21.87■■□□□ 1.09
COMMD5-202ENST00000402718 TSPYL4Q9UJ04 414 aa21.87■■□□□ 1.09
COMMD5-202ENST00000402718 RTCBQ9Y3I0 505 aaKnown RBP21.87■■□□□ 1.09
COMMD5-202ENST00000402718 TJP1Q07157 1748 aa21.87■■□□□ 1.09
COMMD5-202ENST00000402718 CASZ1Q86V15 1759 aa21.87■■□□□ 1.09
COMMD5-202ENST00000402718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.86■■□□□ 1.09
COMMD5-202ENST00000402718 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
COMMD5-202ENST00000402718 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
COMMD5-202ENST00000402718 COL23A1Q86Y22 540 aaPredicted RBP21.86■■□□□ 1.09
COMMD5-202ENST00000402718 SLC16A10Q8TF71 515 aa21.86■■□□□ 1.09
COMMD5-202ENST00000402718 MTFR1LQ9H019 292 aa21.86■■□□□ 1.09
COMMD5-202ENST00000402718 SPON1Q9HCB6 807 aa21.86■■□□□ 1.09
COMMD5-202ENST00000402718 BABAM1Q9NWV8 329 aa21.86■■□□□ 1.09
COMMD5-202ENST00000402718 QSER1Q2KHR3 1735 aa21.86■■□□□ 1.09
COMMD5-202ENST00000402718 CALD1Q05682 793 aaKnown RBP21.85■■□□□ 1.09
COMMD5-202ENST00000402718 CCDC87Q9NVE4 849 aa21.85■■□□□ 1.09
COMMD5-202ENST00000402718 COL5A3P25940 1745 aaPredicted RBP21.85■■□□□ 1.09
COMMD5-202ENST00000402718 RPS6KA4O75676 772 aa21.84■■□□□ 1.09
COMMD5-202ENST00000402718 SNRPA1P09661 255 aaKnown RBP21.84■■□□□ 1.09
COMMD5-202ENST00000402718 AMIGO3Q86WK7 504 aa21.84■■□□□ 1.09
COMMD5-202ENST00000402718 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
COMMD5-202ENST00000402718 ADRA2BP18089 450 aa21.83■■□□□ 1.09
COMMD5-202ENST00000402718 SMIM5Q71RC9 77 aa21.83■■□□□ 1.09
COMMD5-202ENST00000402718 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.08
COMMD5-202ENST00000402718 TRAPPC3LQ5T215 181 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms