RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CAVIN1Q6NZI2 390 aaKnown RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 KIAA1211Q6ZU35 1233 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 PHAXQ9H814 394 aaKnown RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 C9orf78Q9NZ63 289 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-201ENST00000401921 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
HDAC9-201ENST00000401921 SRGAP3O43295 1099 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 MX1P20591 662 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 HOXC9P31274 260 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 ZNF530Q6P9A1 599 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-201ENST00000401921 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 USP6P35125 1406 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 PTMSP20962 102 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 PIAS4Q8N2W9 510 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-201ENST00000401921 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
HDAC9-201ENST00000401921 ZBTB22O15209 634 aa9.37□□□□□ -0.91
HDAC9-201ENST00000401921 PDIA4P13667 645 aaKnown RBP9.37□□□□□ -0.91
HDAC9-201ENST00000401921 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
HDAC9-201ENST00000401921 ZGPATQ8N5A5 531 aaKnown RBP9.37□□□□□ -0.91
HDAC9-201ENST00000401921 KIF20BQ96Q89 1820 aa9.37□□□□□ -0.91
HDAC9-201ENST00000401921 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
HDAC9-201ENST00000401921 KIF2CQ99661 725 aa9.37□□□□□ -0.91
HDAC9-201ENST00000401921 BAG4O95429 457 aaKnown RBP9.37□□□□□ -0.91
HDAC9-201ENST00000401921 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
HDAC9-201ENST00000401921 SBNO1A3KN83 1393 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 CSB-PGBD3P0DP91 1061 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 RRAGDQ9NQL2 400 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-201ENST00000401921 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 PI4KAP2A4QPH2 592 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 BTBD11A6QL63 1104 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 PI4KAP1Q8N8J0 262 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
HDAC9-201ENST00000401921 KIAA0232Q92628 1395 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-201ENST00000401921 LGR6Q9HBX8 967 aa9.36□□□□□ -0.91
HDAC9-201ENST00000401921 PKP1Q13835 747 aa9.35□□□□□ -0.91
HDAC9-201ENST00000401921 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
HDAC9-201ENST00000401921 ATP8B2P98198 1209 aa9.35□□□□□ -0.91
HDAC9-201ENST00000401921 PPP4R3CPQ6ZMV5 832 aa9.35□□□□□ -0.91
HDAC9-201ENST00000401921 ANKLE2Q86XL3 938 aa9.35□□□□□ -0.91
HDAC9-201ENST00000401921 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
HDAC9-201ENST00000401921 PLEKHO1Q53GL0 409 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-201ENST00000401921 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 CCDC9Q9Y3X0 531 aaKnown RBP9.34□□□□□ -0.91
HDAC9-201ENST00000401921 DIP2BQ9P265 1576 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 NASPP49321 788 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-201ENST00000401921 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 PLEKHG1Q9ULL1 1385 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 CDC42BPGQ6DT37 1551 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 RIMBP3CA6NJZ7 1639 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 RIMBP3BA6NNM3 1639 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 RIMBP3Q9UFD9 1639 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 KCNQ3O43525 872 aa9.34□□□□□ -0.91
HDAC9-201ENST00000401921 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
HDAC9-201ENST00000401921 IFIT2P09913 472 aaKnown RBP9.33□□□□□ -0.92
HDAC9-201ENST00000401921 AGLP35573 1532 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 NBPF6Q5VWK0 638 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 NBPF4Q96M43 638 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 ESYT1Q9BSJ8 1104 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 CWC22Q9HCG8 908 aaKnown RBP9.33□□□□□ -0.92
HDAC9-201ENST00000401921 NLRP2Q9NX02 1062 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 ADAMTS13Q76LX8 1427 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 ARHGEF10O15013 1369 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 IGSF1Q8N6C5 1336 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 PTMAP06454 111 aaKnown RBP9.33□□□□□ -0.92
HDAC9-201ENST00000401921 CLASRPQ8N2M8 674 aaKnown RBP9.33□□□□□ -0.92
HDAC9-201ENST00000401921 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 DDX54Q8TDD1 881 aaKnown RBP9.33□□□□□ -0.92
HDAC9-201ENST00000401921 DNAAF4Q8WXU2 420 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 SIL1Q9H173 461 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 VIRMAQ69YN4 1812 aaKnown RBP9.33□□□□□ -0.92
HDAC9-201ENST00000401921 ANKRD26Q9UPS8 1709 aa9.33□□□□□ -0.92
HDAC9-201ENST00000401921 KIF24Q5T7B8 1368 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 MAP3K5Q99683 1374 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 GAS2L3Q86XJ1 694 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 TMX3Q96JJ7 454 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 CHMP4AQ9BY43 222 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 USP44Q9H0E7 712 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
HDAC9-201ENST00000401921 DTNBO60941 627 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 NBPF7P0C2Y1 421 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-201ENST00000401921 MYL6BP14649 208 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
HDAC9-201ENST00000401921 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
HDAC9-201ENST00000401921 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 RHPN1Q8TCX5 695 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
HDAC9-201ENST00000401921 CHMLP26374 656 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 GDPD2Q9HCC8 539 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 PROSER2Q86WR7 435 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-201ENST00000401921 GPATCH3Q96I76 525 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms