RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
SCFD2-202ENST00000401642 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
SCFD2-202ENST00000401642 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
SCFD2-202ENST00000401642 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
SCFD2-202ENST00000401642 RAB3GAP1Q15042 981 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 AGLP35573 1532 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 ATP10DQ9P241 1426 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 RIMS1Q86UR5 1692 aaKnown RBP13.6□□□□□ -0.23
SCFD2-202ENST00000401642 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
SCFD2-202ENST00000401642 OVOS2A0A0J9YW53 1432 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 CRB1P82279 1406 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 OVOS2Q6IE36 1432 aa13.6□□□□□ -0.23
SCFD2-202ENST00000401642 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 ERC2O15083 957 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 TEFQ10587 303 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 RGS12O14924 1447 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 RABEP1Q15276 862 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
SCFD2-202ENST00000401642 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 SBNO1A3KN83 1393 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 SRGAP3O43295 1099 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 ST18O60284 1047 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
SCFD2-202ENST00000401642 MX1P20591 662 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
SCFD2-202ENST00000401642 PLEKHG1Q9ULL1 1385 aa13.58□□□□□ -0.23
SCFD2-202ENST00000401642 PI4KAP2A4QPH2 592 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 REC8O95072 547 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 PI4KAP1Q8N8J0 262 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 NBPF7P0C2Y1 421 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
SCFD2-202ENST00000401642 TTC21AQ8NDW8 1320 aa13.58□□□□□ -0.24
SCFD2-202ENST00000401642 PIP4K2AP48426 406 aaPredicted RBP13.57□□□□□ -0.24
SCFD2-202ENST00000401642 ZC3H6P61129 1189 aaKnown RBP13.57□□□□□ -0.24
SCFD2-202ENST00000401642 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
SCFD2-202ENST00000401642 CCDC9Q9Y3X0 531 aaKnown RBP13.57□□□□□ -0.24
SCFD2-202ENST00000401642 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
SCFD2-202ENST00000401642 JARID2Q92833 1246 aaPredicted RBP13.57□□□□□ -0.24
SCFD2-202ENST00000401642 GNAI3P08754 354 aa13.57□□□□□ -0.24
SCFD2-202ENST00000401642 USP44Q9H0E7 712 aa13.57□□□□□ -0.24
SCFD2-202ENST00000401642 KIAA0232Q92628 1395 aa13.56□□□□□ -0.24
SCFD2-202ENST00000401642 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
SCFD2-202ENST00000401642 DDIT3P35638 169 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
SCFD2-202ENST00000401642 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 TECPR2O15040 1411 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 SETD1AO15047 1707 aaKnown RBP13.55□□□□□ -0.24
SCFD2-202ENST00000401642 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 NAP1L5Q96NT1 182 aaPredicted RBP13.55□□□□□ -0.24
SCFD2-202ENST00000401642 IL25Q9H293 177 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
SCFD2-202ENST00000401642 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
SCFD2-202ENST00000401642 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
SCFD2-202ENST00000401642 MRE11P49959 708 aa13.54□□□□□ -0.24
SCFD2-202ENST00000401642 CPA1P15085 419 aa13.54□□□□□ -0.24
SCFD2-202ENST00000401642 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
SCFD2-202ENST00000401642 CWF19L2Q2TBE0 894 aaKnown RBP13.54□□□□□ -0.24
SCFD2-202ENST00000401642 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
SCFD2-202ENST00000401642 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
SCFD2-202ENST00000401642 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 SIL1Q9H173 461 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
SCFD2-202ENST00000401642 USP31Q70CQ4 1352 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
SCFD2-202ENST00000401642 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 MYL6BP14649 208 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 MPNDQ8N594 471 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
SCFD2-202ENST00000401642 RNF214Q8ND24 703 aa13.52□□□□□ -0.24
SCFD2-202ENST00000401642 TMX3Q96JJ7 454 aa13.52□□□□□ -0.24
SCFD2-202ENST00000401642 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.25
SCFD2-202ENST00000401642 C3P01024 1663 aa13.51□□□□□ -0.25
SCFD2-202ENST00000401642 SOS1Q07889 1333 aaPredicted RBP13.51□□□□□ -0.25
SCFD2-202ENST00000401642 CHMLP26374 656 aa13.51□□□□□ -0.25
SCFD2-202ENST00000401642 MCCP23508 829 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 RBM10P98175 930 aaKnown RBP13.5□□□□□ -0.25
SCFD2-202ENST00000401642 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 CABLES1Q8TDN4 633 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms