RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NEFMP07197 916 aa16.4■□□□□ 0.22
HLA-DQB1-203ENST00000399082 RIPK4P57078 832 aa16.4■□□□□ 0.22
HLA-DQB1-203ENST00000399082 PIGBQ92521 554 aa16.4■□□□□ 0.22
HLA-DQB1-203ENST00000399082 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-203ENST00000399082 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-203ENST00000399082 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.21
HLA-DQB1-203ENST00000399082 ERVV-2B6SEH9 535 aa16.39■□□□□ 0.21
HLA-DQB1-203ENST00000399082 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-203ENST00000399082 NEUROD2Q15784 382 aa16.38■□□□□ 0.21
HLA-DQB1-203ENST00000399082 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-203ENST00000399082 SLC52A2Q9HAB3 445 aa16.38■□□□□ 0.21
HLA-DQB1-203ENST00000399082 LY75O60449 1722 aa16.37■□□□□ 0.21
HLA-DQB1-203ENST00000399082 NFATC2IPQ8NCF5 419 aa16.37■□□□□ 0.21
HLA-DQB1-203ENST00000399082 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
HLA-DQB1-203ENST00000399082 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
HLA-DQB1-203ENST00000399082 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
HLA-DQB1-203ENST00000399082 RREB1Q92766 1687 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 APBA3O96018 575 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 CABP4P57796 275 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 ATG3Q9NT62 314 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 ASAP1Q9ULH1 1129 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
HLA-DQB1-203ENST00000399082 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
HLA-DQB1-203ENST00000399082 SOCS7O14512 581 aa16.34■□□□□ 0.21
HLA-DQB1-203ENST00000399082 PLSCR1O15162 318 aa16.33■□□□□ 0.2
HLA-DQB1-203ENST00000399082 LMOD3Q0VAK6 560 aa16.33■□□□□ 0.2
HLA-DQB1-203ENST00000399082 PROM2Q8N271 834 aa16.33■□□□□ 0.2
HLA-DQB1-203ENST00000399082 CAMKK2Q96RR4 588 aa16.33■□□□□ 0.2
HLA-DQB1-203ENST00000399082 EN1Q05925 392 aaPredicted RBP16.32■□□□□ 0.2
HLA-DQB1-203ENST00000399082 TEFQ10587 303 aa16.32■□□□□ 0.2
HLA-DQB1-203ENST00000399082 SLC39A6Q13433 755 aa16.32■□□□□ 0.2
HLA-DQB1-203ENST00000399082 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
HLA-DQB1-203ENST00000399082 NUP188Q5SRE5 1749 aa16.32■□□□□ 0.2
HLA-DQB1-203ENST00000399082 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
HLA-DQB1-203ENST00000399082 ZNF521Q96K83 1311 aa16.31■□□□□ 0.2
HLA-DQB1-203ENST00000399082 KCNQ3O43525 872 aa16.31■□□□□ 0.2
HLA-DQB1-203ENST00000399082 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-203ENST00000399082 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-203ENST00000399082 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
HLA-DQB1-203ENST00000399082 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
HLA-DQB1-203ENST00000399082 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
HLA-DQB1-203ENST00000399082 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-203ENST00000399082 BAG6P46379 1132 aa16.3■□□□□ 0.2
HLA-DQB1-203ENST00000399082 SF3B2Q13435 895 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB1-203ENST00000399082 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-203ENST00000399082 TJP1Q07157 1748 aa16.3■□□□□ 0.2
HLA-DQB1-203ENST00000399082 TAF1LQ8IZX4 1826 aa16.29■□□□□ 0.2
HLA-DQB1-203ENST00000399082 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB1-203ENST00000399082 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
HLA-DQB1-203ENST00000399082 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
HLA-DQB1-203ENST00000399082 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
HLA-DQB1-203ENST00000399082 KCNQ4P56696 695 aa16.28■□□□□ 0.2
HLA-DQB1-203ENST00000399082 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
HLA-DQB1-203ENST00000399082 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-203ENST00000399082 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
HLA-DQB1-203ENST00000399082 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
HLA-DQB1-203ENST00000399082 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-203ENST00000399082 C5P01031 1676 aa16.27■□□□□ 0.19
HLA-DQB1-203ENST00000399082 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
HLA-DQB1-203ENST00000399082 CHL1O00533 1208 aa16.26■□□□□ 0.19
HLA-DQB1-203ENST00000399082 SIK1P57059 783 aa16.26■□□□□ 0.19
HLA-DQB1-203ENST00000399082 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
HLA-DQB1-203ENST00000399082 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-203ENST00000399082 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-203ENST00000399082 PTCD1O75127 700 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-203ENST00000399082 ITPK1Q13572 414 aa16.25■□□□□ 0.19
HLA-DQB1-203ENST00000399082 HEG1Q9ULI3 1381 aa16.25■□□□□ 0.19
HLA-DQB1-203ENST00000399082 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
HLA-DQB1-203ENST00000399082 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-203ENST00000399082 IL16Q14005 1332 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 SLC27A3Q5K4L6 730 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 WDR63Q8IWG1 891 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 ANO8Q9HCE9 1232 aaPredicted RBP16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
HLA-DQB1-203ENST00000399082 C4BP0C0L5 1744 aa16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 PRAMEF22A3QJZ6 481 aa16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
HLA-DQB1-203ENST00000399082 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.19
HLA-DQB1-203ENST00000399082 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
HLA-DQB1-203ENST00000399082 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
HLA-DQB1-203ENST00000399082 KRT24Q2M2I5 525 aa16.21■□□□□ 0.19
HLA-DQB1-203ENST00000399082 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
HLA-DQB1-203ENST00000399082 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
HLA-DQB1-203ENST00000399082 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
HLA-DQB1-203ENST00000399082 GNAI1P63096 354 aa16.2■□□□□ 0.18
HLA-DQB1-203ENST00000399082 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
HLA-DQB1-203ENST00000399082 TSR2Q969E8 191 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB1-203ENST00000399082 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
HLA-DQB1-203ENST00000399082 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
HLA-DQB1-203ENST00000399082 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms