RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 RABEP1Q15276 862 aa13.15□□□□□ -0.3
RGPD2-201ENST00000398146 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
RGPD2-201ENST00000398146 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
RGPD2-201ENST00000398146 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.3
RGPD2-201ENST00000398146 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
RGPD2-201ENST00000398146 SLC5A1P13866 664 aa13.15□□□□□ -0.31
RGPD2-201ENST00000398146 DYDC1Q8WWB3 177 aa13.15□□□□□ -0.31
RGPD2-201ENST00000398146 BCAR3O75815 825 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 CCDC117Q8IWD4 279 aaPredicted RBP13.14□□□□□ -0.31
RGPD2-201ENST00000398146 USP47Q96K76 1375 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 LPXNO60711 386 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
RGPD2-201ENST00000398146 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 AFAP1Q8N556 730 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 GPR162Q16538 588 aa13.14□□□□□ -0.31
RGPD2-201ENST00000398146 BAG4O95429 457 aaKnown RBP13.13□□□□□ -0.31
RGPD2-201ENST00000398146 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 NAPBQ9H115 298 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 TOM1O60784 492 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 FERP16591 822 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
RGPD2-201ENST00000398146 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 PDE4AP27815 886 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 TSNARE1Q96NA8 513 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 MPNDQ8N594 471 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 PRC1O43663 620 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 CSPG5O95196 566 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 ZNF397Q8NF99 534 aaPredicted RBP13.13□□□□□ -0.31
RGPD2-201ENST00000398146 IL1RAPL2Q9NP60 686 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 INCENPQ9NQS7 918 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
RGPD2-201ENST00000398146 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
RGPD2-201ENST00000398146 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
RGPD2-201ENST00000398146 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
RGPD2-201ENST00000398146 SP4Q02446 784 aa13.12□□□□□ -0.31
RGPD2-201ENST00000398146 PRKG1Q13976 671 aa13.12□□□□□ -0.31
RGPD2-201ENST00000398146 IFIT5Q13325 482 aaKnown RBP13.12□□□□□ -0.31
RGPD2-201ENST00000398146 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
RGPD2-201ENST00000398146 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
RGPD2-201ENST00000398146 NACADO15069 1562 aa13.12□□□□□ -0.31
RGPD2-201ENST00000398146 WASF1Q92558 559 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 EXOSC9Q06265 439 aaKnown RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 CCDC39Q9UFE4 941 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 PDCP20941 246 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 PHACTR2O75167 634 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 ZNF526Q8TF50 670 aaPredicted RBP13.11□□□□□ -0.31
RGPD2-201ENST00000398146 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
RGPD2-201ENST00000398146 FOXO3O43524 673 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 RAB3IL1Q8TBN0 382 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 FERMT1Q9BQL6 677 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
RGPD2-201ENST00000398146 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 CCDC144CPQ8IYA2 1237 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
RGPD2-201ENST00000398146 RTEL1-TNFRSF6BF6WH68 1400 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 CCP110O43303 1012 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 JAKMIP1Q96N16 626 aaKnown RBP13.1□□□□□ -0.31
RGPD2-201ENST00000398146 CEP131Q9UPN4 1083 aa13.1□□□□□ -0.31
RGPD2-201ENST00000398146 NDC80O14777 642 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 TERF1P54274 439 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 BCCIPQ9P287 314 aaKnown RBP eCLIP13.09□□□□□ -0.31
RGPD2-201ENST00000398146 ANKRD1Q15327 319 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
RGPD2-201ENST00000398146 ZBTB21Q9ULJ3 1066 aa13.09□□□□□ -0.31
RGPD2-201ENST00000398146 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
RGPD2-201ENST00000398146 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
RGPD2-201ENST00000398146 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
RGPD2-201ENST00000398146 LRRC45Q96CN5 670 aa13.08□□□□□ -0.32
RGPD2-201ENST00000398146 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
RGPD2-201ENST00000398146 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
RGPD2-201ENST00000398146 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
RGPD2-201ENST00000398146 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
RGPD2-201ENST00000398146 CFAP45Q9UL16 551 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms