RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 JAKMIP3Q5VZ66 844 aa20.42■□□□□ 0.86
MCF2L-208ENST00000397030 STAC3Q96MF2 364 aa20.42■□□□□ 0.86
MCF2L-208ENST00000397030 KIAA1328Q86T90 577 aa20.42■□□□□ 0.86
MCF2L-208ENST00000397030 SLF2Q8IX21 1173 aa20.42■□□□□ 0.86
MCF2L-208ENST00000397030 ZNF354CQ86Y25 554 aa20.41■□□□□ 0.86
MCF2L-208ENST00000397030 AEBP1Q8IUX7 1158 aa20.41■□□□□ 0.86
MCF2L-208ENST00000397030 CTNNBL1Q8WYA6 563 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-208ENST00000397030 ANKRD18BA2A2Z9 1011 aa20.41■□□□□ 0.86
MCF2L-208ENST00000397030 MACROD2A1Z1Q3 448 aa20.41■□□□□ 0.86
MCF2L-208ENST00000397030 BOLA2Q9H3K6 86 aa20.41■□□□□ 0.86
MCF2L-208ENST00000397030 CABP5Q9NP86 173 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 FGD6Q6ZV73 1430 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 HMGN5P82970 282 aaKnown RBP20.4■□□□□ 0.86
MCF2L-208ENST00000397030 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 CCP110O43303 1012 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 PLS1Q14651 629 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 SPATA32Q96LK8 384 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
MCF2L-208ENST00000397030 CHRNA2Q15822 529 aa20.39■□□□□ 0.86
MCF2L-208ENST00000397030 MAP3K12Q12852 859 aa20.39■□□□□ 0.85
MCF2L-208ENST00000397030 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
MCF2L-208ENST00000397030 PUF60Q9UHX1 559 aaKnown RBP20.39■□□□□ 0.85
MCF2L-208ENST00000397030 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
MCF2L-208ENST00000397030 KRT28Q7Z3Y7 464 aa20.39■□□□□ 0.85
MCF2L-208ENST00000397030 TXLNBQ8N3L3 684 aa20.39■□□□□ 0.85
MCF2L-208ENST00000397030 SPTY2D1Q68D10 685 aaPredicted RBP20.39■□□□□ 0.85
MCF2L-208ENST00000397030 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
MCF2L-208ENST00000397030 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-208ENST00000397030 TAF4BQ92750 862 aa20.38■□□□□ 0.85
MCF2L-208ENST00000397030 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
MCF2L-208ENST00000397030 DNA2P51530 1060 aa20.38■□□□□ 0.85
MCF2L-208ENST00000397030 CCDC144CPQ8IYA2 1237 aa20.38■□□□□ 0.85
MCF2L-208ENST00000397030 TSG101Q99816 390 aa20.38■□□□□ 0.85
MCF2L-208ENST00000397030 CEP131Q9UPN4 1083 aa20.38■□□□□ 0.85
MCF2L-208ENST00000397030 RABEP1Q15276 862 aa20.37■□□□□ 0.85
MCF2L-208ENST00000397030 GUCY1B3Q02153 619 aa20.37■□□□□ 0.85
MCF2L-208ENST00000397030 KLHL10Q6JEL2 608 aa20.37■□□□□ 0.85
MCF2L-208ENST00000397030 POLD1P28340 1107 aa20.37■□□□□ 0.85
MCF2L-208ENST00000397030 CTCFLQ8NI51 663 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-208ENST00000397030 MCM2P49736 904 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 NBPF6Q5VWK0 638 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 DUSP27Q5VZP5 1158 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 NBPF5PQ86XG9 351 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-208ENST00000397030 CKAP2LQ8IYA6 745 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 NBPF4Q96M43 638 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 BICD1Q96G01 975 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 SMARCA5O60264 1052 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-208ENST00000397030 MMRN2Q9H8L6 949 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 NLRP5P59047 1200 aa20.36■□□□□ 0.85
MCF2L-208ENST00000397030 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-208ENST00000397030 CCDC8Q9H0W5 538 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-208ENST00000397030 MPHOSPH6Q99547 160 aaKnown RBP20.35■□□□□ 0.85
MCF2L-208ENST00000397030 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 FAM43AQ8N2R8 423 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 HOMER2Q9NSB8 354 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 KRT85P78386 507 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 VEZTQ9HBM0 779 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 PHF8Q9UPP1 1060 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 AMOTL2Q9Y2J4 779 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
MCF2L-208ENST00000397030 CCDC113Q9H0I3 377 aa20.35■□□□□ 0.85
MCF2L-208ENST00000397030 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
MCF2L-208ENST00000397030 USP8P40818 1118 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 MRPS9P82933 396 aaKnown RBP20.34■□□□□ 0.85
MCF2L-208ENST00000397030 HSP90AB3PQ58FF7 597 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 NCOA2Q15596 1464 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 PICALMQ13492 652 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 ATF7IPQ6VMQ6 1270 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 HLA-DOAP06340 250 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 TMEM266Q2M3C6 531 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 ZNF397Q8NF99 534 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-208ENST00000397030 CBFA2T2O43439 604 aa20.34■□□□□ 0.85
MCF2L-208ENST00000397030 CETN2P41208 172 aa20.33■□□□□ 0.85
MCF2L-208ENST00000397030 CCDC192P0DO97 292 aa20.33■□□□□ 0.85
MCF2L-208ENST00000397030 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.85
MCF2L-208ENST00000397030 CAMK4Q16566 473 aa20.33■□□□□ 0.84
MCF2L-208ENST00000397030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.33■□□□□ 0.84
MCF2L-208ENST00000397030 ZNF408Q9H9D4 720 aa20.33■□□□□ 0.84
MCF2L-208ENST00000397030 PABPN1LA6NDY0 278 aaKnown RBP20.33■□□□□ 0.84
MCF2L-208ENST00000397030 IQCA1Q86XH1 822 aa20.32■□□□□ 0.84
MCF2L-208ENST00000397030 GOPCQ9HD26 462 aa20.32■□□□□ 0.84
MCF2L-208ENST00000397030 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
MCF2L-208ENST00000397030 IGF1RP08069 1367 aa20.32■□□□□ 0.84
MCF2L-208ENST00000397030 CTNNA2P26232 953 aa20.32■□□□□ 0.84
MCF2L-208ENST00000397030 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
MCF2L-208ENST00000397030 BAG4O95429 457 aaKnown RBP20.32■□□□□ 0.84
MCF2L-208ENST00000397030 ATP6V1AP38606 617 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 CCDC178Q5BJE1 867 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 CACNA2D4Q7Z3S7 1137 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 HDAC9Q9UKV0 1011 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 TOM1O60784 492 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
MCF2L-208ENST00000397030 SYCP3Q8IZU3 236 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 NME9Q86XW9 330 aa20.31■□□□□ 0.84
MCF2L-208ENST00000397030 NAIPQ13075 1403 aa20.3■□□□□ 0.84
MCF2L-208ENST00000397030 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
MCF2L-208ENST00000397030 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
MCF2L-208ENST00000397030 KIF20AO95235 890 aa20.3■□□□□ 0.84
MCF2L-208ENST00000397030 NF2P35240 595 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms