RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 LGR6Q9HBX8 967 aa25.22■■□□□ 1.63
TRPT1-203ENST00000394547 C5P01031 1676 aa25.2■■□□□ 1.63
TRPT1-203ENST00000394547 NFATC2IPQ8NCF5 419 aa25.2■■□□□ 1.62
TRPT1-203ENST00000394547 ADAMTS8Q9UP79 889 aa25.2■■□□□ 1.62
TRPT1-203ENST00000394547 NFE2L2Q16236 605 aa25.19■■□□□ 1.62
TRPT1-203ENST00000394547 RTF1Q92541 710 aaKnown RBP25.19■■□□□ 1.62
TRPT1-203ENST00000394547 ATG3Q9NT62 314 aa25.19■■□□□ 1.62
TRPT1-203ENST00000394547 CCNL1Q9UK58 526 aaPredicted RBP25.19■■□□□ 1.62
TRPT1-203ENST00000394547 TAF1LQ8IZX4 1826 aa25.19■■□□□ 1.62
TRPT1-203ENST00000394547 IL17REQ8NFR9 667 aa25.18■■□□□ 1.62
TRPT1-203ENST00000394547 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
TRPT1-203ENST00000394547 MRS2Q9HD23 443 aa25.18■■□□□ 1.62
TRPT1-203ENST00000394547 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
TRPT1-203ENST00000394547 ASAP1Q9ULH1 1129 aa25.18■■□□□ 1.62
TRPT1-203ENST00000394547 CICQ96RK0 1608 aaPredicted RBP25.18■■□□□ 1.62
TRPT1-203ENST00000394547 TEFQ10587 303 aa25.16■■□□□ 1.62
TRPT1-203ENST00000394547 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
TRPT1-203ENST00000394547 QSER1Q2KHR3 1735 aa25.15■■□□□ 1.62
TRPT1-203ENST00000394547 UBR2Q8IWV8 1755 aa25.15■■□□□ 1.62
TRPT1-203ENST00000394547 LOC102724428A0A0B4J2F2 783 aa25.14■■□□□ 1.62
TRPT1-203ENST00000394547 SIK1P57059 783 aa25.14■■□□□ 1.62
TRPT1-203ENST00000394547 ANO8Q9HCE9 1232 aaPredicted RBP25.14■■□□□ 1.62
TRPT1-203ENST00000394547 STK32BQ9NY57 414 aa25.14■■□□□ 1.62
TRPT1-203ENST00000394547 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
TRPT1-203ENST00000394547 SLC15A2Q16348 729 aa25.12■■□□□ 1.61
TRPT1-203ENST00000394547 C4BP0C0L5 1744 aa25.12■■□□□ 1.61
TRPT1-203ENST00000394547 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
TRPT1-203ENST00000394547 LMOD3Q0VAK6 560 aa25.11■■□□□ 1.61
TRPT1-203ENST00000394547 R3HDM1Q15032 1099 aaKnown RBP25.11■■□□□ 1.61
TRPT1-203ENST00000394547 MCM10Q7L590 875 aa25.11■■□□□ 1.61
TRPT1-203ENST00000394547 CCDC146Q8IYE0 955 aa25.11■■□□□ 1.61
TRPT1-203ENST00000394547 COL5A3P25940 1745 aaPredicted RBP25.11■■□□□ 1.61
TRPT1-203ENST00000394547 KCPQ6ZWJ8 1503 aa25.11■■□□□ 1.61
TRPT1-203ENST00000394547 RIPK4P57078 832 aa25.09■■□□□ 1.61
TRPT1-203ENST00000394547 AKT1S1Q96B36 256 aa25.09■■□□□ 1.61
TRPT1-203ENST00000394547 CASZ1Q86V15 1759 aa25.08■■□□□ 1.61
TRPT1-203ENST00000394547 TUBGCP6Q96RT7 1819 aa25.08■■□□□ 1.61
TRPT1-203ENST00000394547 ATP6V1AP38606 617 aa25.08■■□□□ 1.61
TRPT1-203ENST00000394547 KCNQ4P56696 695 aa25.08■■□□□ 1.61
TRPT1-203ENST00000394547 TJP1Q07157 1748 aa25.08■■□□□ 1.61
TRPT1-203ENST00000394547 PSDA5PKW4 1024 aaPredicted RBP25.07■■□□□ 1.6
TRPT1-203ENST00000394547 DCTN1Q14203 1278 aa25.07■■□□□ 1.6
TRPT1-203ENST00000394547 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
TRPT1-203ENST00000394547 RBM42Q9BTD8 480 aaKnown RBP25.07■■□□□ 1.6
TRPT1-203ENST00000394547 ZNF827Q17R98 1081 aa25.06■■□□□ 1.6
TRPT1-203ENST00000394547 DIEXFQ68CQ4 756 aaKnown RBP25.06■■□□□ 1.6
TRPT1-203ENST00000394547 BTBD11A6QL63 1104 aa25.05■■□□□ 1.6
TRPT1-203ENST00000394547 SLC39A6Q13433 755 aa25.05■■□□□ 1.6
TRPT1-203ENST00000394547 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
TRPT1-203ENST00000394547 VSIG10Q8N0Z9 540 aa25.05■■□□□ 1.6
TRPT1-203ENST00000394547 SLC4A9Q96Q91 983 aa25.05■■□□□ 1.6
TRPT1-203ENST00000394547 KDM3BQ7LBC6 1761 aa25.04■■□□□ 1.6
TRPT1-203ENST00000394547 PTCD1O75127 700 aaKnown RBP25.04■■□□□ 1.6
TRPT1-203ENST00000394547 ITPK1Q13572 414 aa25.04■■□□□ 1.6
TRPT1-203ENST00000394547 CCER2I3L3R5 266 aa25.03■■□□□ 1.6
TRPT1-203ENST00000394547 TAF7Q15545 349 aaPredicted RBP25.03■■□□□ 1.6
TRPT1-203ENST00000394547 UBR3Q6ZT12 1888 aa25.02■■□□□ 1.6
TRPT1-203ENST00000394547 LINC00116Q8NCU8 138 aa25.02■■□□□ 1.6
TRPT1-203ENST00000394547 TFCP2L1Q9NZI6 479 aa25.01■■□□□ 1.59
TRPT1-203ENST00000394547 RRP7AQ9Y3A4 280 aaKnown RBP25.01■■□□□ 1.59
TRPT1-203ENST00000394547 APAF1O14727 1248 aa25■■□□□ 1.59
TRPT1-203ENST00000394547 AK7Q96M32 723 aa25■■□□□ 1.59
TRPT1-203ENST00000394547 CNTNAP4Q9C0A0 1308 aa25■■□□□ 1.59
TRPT1-203ENST00000394547 LRP5O75197 1615 aa25■■□□□ 1.59
TRPT1-203ENST00000394547 NEUROD2Q15784 382 aa24.99■■□□□ 1.59
TRPT1-203ENST00000394547 NCBP3Q53F19 620 aaKnown RBP24.99■■□□□ 1.59
TRPT1-203ENST00000394547 RC3H1Q5TC82 1133 aaKnown RBP24.99■■□□□ 1.59
TRPT1-203ENST00000394547 FMNL2Q96PY5 1086 aa24.99■■□□□ 1.59
TRPT1-203ENST00000394547 BABAM1Q9NWV8 329 aa24.99■■□□□ 1.59
TRPT1-203ENST00000394547 HEG1Q9ULI3 1381 aa24.99■■□□□ 1.59
TRPT1-203ENST00000394547 TRIM35Q9UPQ4 493 aa24.99■■□□□ 1.59
TRPT1-203ENST00000394547 PNPLA7Q6ZV29 1317 aa24.98■■□□□ 1.59
TRPT1-203ENST00000394547 FLAD1Q8NFF5 587 aa24.98■■□□□ 1.59
TRPT1-203ENST00000394547 ZNF496Q96IT1 587 aaPredicted RBP24.97■■□□□ 1.59
TRPT1-203ENST00000394547 THUMPD2Q9BTF0 503 aaKnown RBP24.97■■□□□ 1.59
TRPT1-203ENST00000394547 TEX13AQ9BXU3 409 aaPredicted RBP24.96■■□□□ 1.59
TRPT1-203ENST00000394547 SSFA2P28290 1259 aa24.95■■□□□ 1.58
TRPT1-203ENST00000394547 DNAJC10Q8IXB1 793 aa24.94■■□□□ 1.58
TRPT1-203ENST00000394547 FAM9BQ8IZU0 186 aa24.94■■□□□ 1.58
TRPT1-203ENST00000394547 SLC16A10Q8TF71 515 aa24.94■■□□□ 1.58
TRPT1-203ENST00000394547 MYH14Q7Z406 1995 aaKnown RBP24.94■■□□□ 1.58
TRPT1-203ENST00000394547 LAMB4A4D0S4 1761 aa24.93■■□□□ 1.58
TRPT1-203ENST00000394547 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
TRPT1-203ENST00000394547 CCDC27Q2M243 656 aa24.93■■□□□ 1.58
TRPT1-203ENST00000394547 COL24A1Q17RW2 1714 aa24.92■■□□□ 1.58
TRPT1-203ENST00000394547 GNPATO15228 680 aa24.92■■□□□ 1.58
TRPT1-203ENST00000394547 KCNQ3O43525 872 aa24.92■■□□□ 1.58
TRPT1-203ENST00000394547 CYP19A1P11511 503 aaPredicted RBP24.92■■□□□ 1.58
TRPT1-203ENST00000394547 CRKLP46109 303 aaKnown RBP24.92■■□□□ 1.58
TRPT1-203ENST00000394547 RTCBQ9Y3I0 505 aaKnown RBP24.91■■□□□ 1.58
TRPT1-203ENST00000394547 RPS6KA4O75676 772 aa24.9■■□□□ 1.58
TRPT1-203ENST00000394547 STARD3NLO95772 234 aa24.9■■□□□ 1.58
TRPT1-203ENST00000394547 PDGFDQ9GZP0 370 aaPredicted RBP24.9■■□□□ 1.58
TRPT1-203ENST00000394547 MTFR1LQ9H019 292 aa24.9■■□□□ 1.58
TRPT1-203ENST00000394547 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
TRPT1-203ENST00000394547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.89■■□□□ 1.58
TRPT1-203ENST00000394547 SNRPA1P09661 255 aaKnown RBP24.89■■□□□ 1.58
TRPT1-203ENST00000394547 COL23A1Q86Y22 540 aaPredicted RBP24.89■■□□□ 1.58
TRPT1-203ENST00000394547 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
TRPT1-203ENST00000394547 CCDC87Q9NVE4 849 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms