RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CDC45O75419 566 aa22.89■■□□□ 1.25
HOXC6-202ENST00000394331 DIAPH3Q9NSV4 1193 aa22.89■■□□□ 1.25
HOXC6-202ENST00000394331 C3P01024 1663 aa22.88■■□□□ 1.25
HOXC6-202ENST00000394331 ELL2O00472 640 aaPredicted RBP22.88■■□□□ 1.25
HOXC6-202ENST00000394331 CTIFO43310 598 aaKnown RBP22.88■■□□□ 1.25
HOXC6-202ENST00000394331 OGFRQ9NZT2 677 aa22.88■■□□□ 1.25
HOXC6-202ENST00000394331 SYAP1Q96A49 352 aaPredicted RBP22.88■■□□□ 1.25
HOXC6-202ENST00000394331 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
HOXC6-202ENST00000394331 ROBO2Q9HCK4 1378 aa22.87■■□□□ 1.25
HOXC6-202ENST00000394331 HAP1P54257 671 aaPredicted RBP22.87■■□□□ 1.25
HOXC6-202ENST00000394331 C8orf58Q8NAV2 365 aa22.87■■□□□ 1.25
HOXC6-202ENST00000394331 TSC1Q92574 1164 aa22.87■■□□□ 1.25
HOXC6-202ENST00000394331 TTC21BQ7Z4L5 1316 aa22.86■■□□□ 1.25
HOXC6-202ENST00000394331 SYCP1Q15431 976 aa22.86■■□□□ 1.25
HOXC6-202ENST00000394331 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
HOXC6-202ENST00000394331 ITSN1Q15811 1721 aa22.86■■□□□ 1.25
HOXC6-202ENST00000394331 KLHL34Q8N239 644 aa22.86■■□□□ 1.25
HOXC6-202ENST00000394331 PHF14O94880 888 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 ZDHHC9Q9Y397 364 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 ADAMTS13Q76LX8 1427 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 PKP1Q13835 747 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 ANKRD45Q5TZF3 282 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 KIF24Q5T7B8 1368 aa22.85■■□□□ 1.25
HOXC6-202ENST00000394331 FAM83GA6ND36 823 aa22.84■■□□□ 1.25
HOXC6-202ENST00000394331 EIF4A2Q14240 407 aaKnown RBP22.84■■□□□ 1.25
HOXC6-202ENST00000394331 ACEP12821 1306 aa22.83■■□□□ 1.24
HOXC6-202ENST00000394331 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
HOXC6-202ENST00000394331 SULT6B1Q6IMI4 303 aa22.82■■□□□ 1.24
HOXC6-202ENST00000394331 NRKQ7Z2Y5 1582 aa22.82■■□□□ 1.24
HOXC6-202ENST00000394331 CHAF1AQ13111 956 aaPredicted RBP22.81■■□□□ 1.24
HOXC6-202ENST00000394331 RNF214Q8ND24 703 aa22.81■■□□□ 1.24
HOXC6-202ENST00000394331 CGNQ9P2M7 1197 aaKnown RBP22.81■■□□□ 1.24
HOXC6-202ENST00000394331 UBR1Q8IWV7 1749 aa22.81■■□□□ 1.24
HOXC6-202ENST00000394331 C1orf115Q9H7X2 142 aa22.81■■□□□ 1.24
HOXC6-202ENST00000394331 SPDYE4A6NLX3 237 aa22.81■■□□□ 1.24
HOXC6-202ENST00000394331 DCTN1Q14203 1278 aa22.81■■□□□ 1.24
HOXC6-202ENST00000394331 ZNF771Q7L3S4 317 aaPredicted RBP22.81■■□□□ 1.24
HOXC6-202ENST00000394331 ST18O60284 1047 aa22.8■■□□□ 1.24
HOXC6-202ENST00000394331 NSFL1CQ9UNZ2 370 aaKnown RBP22.8■■□□□ 1.24
HOXC6-202ENST00000394331 OVOS2A0A0J9YW53 1432 aa22.8■■□□□ 1.24
HOXC6-202ENST00000394331 OVOS2Q6IE36 1432 aa22.8■■□□□ 1.24
HOXC6-202ENST00000394331 U2AF2P26368 475 aaKnown RBP eCLIP22.79■■□□□ 1.24
HOXC6-202ENST00000394331 CCDC66A2RUB6 948 aa22.79■■□□□ 1.24
HOXC6-202ENST00000394331 TPM3P06753 285 aa22.79■■□□□ 1.24
HOXC6-202ENST00000394331 AEBP1Q8IUX7 1158 aa22.79■■□□□ 1.24
HOXC6-202ENST00000394331 SIRT2Q8IXJ6 389 aa22.79■■□□□ 1.24
HOXC6-202ENST00000394331 DLG5Q8TDM6 1919 aa22.79■■□□□ 1.24
HOXC6-202ENST00000394331 USP6P35125 1406 aa22.78■■□□□ 1.24
HOXC6-202ENST00000394331 CDK11BP21127 795 aaKnown RBP22.78■■□□□ 1.24
HOXC6-202ENST00000394331 CHL1O00533 1208 aa22.78■■□□□ 1.24
HOXC6-202ENST00000394331 FAM193AP78312 1265 aa22.77■■□□□ 1.24
HOXC6-202ENST00000394331 ZNF830Q96NB3 372 aaPredicted RBP22.77■■□□□ 1.24
HOXC6-202ENST00000394331 USP26Q9BXU7 913 aa22.77■■□□□ 1.24
HOXC6-202ENST00000394331 USP31Q70CQ4 1352 aa22.76■■□□□ 1.23
HOXC6-202ENST00000394331 KIAA0232Q92628 1395 aa22.76■■□□□ 1.23
HOXC6-202ENST00000394331 LTKP29376 864 aa22.76■■□□□ 1.23
HOXC6-202ENST00000394331 INTS3Q68E01 1043 aaKnown RBP22.76■■□□□ 1.23
HOXC6-202ENST00000394331 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
HOXC6-202ENST00000394331 RIOK3O14730 519 aaKnown RBP22.75■■□□□ 1.23
HOXC6-202ENST00000394331 KIAA1524Q8TCG1 905 aa22.75■■□□□ 1.23
HOXC6-202ENST00000394331 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.75■■□□□ 1.23
HOXC6-202ENST00000394331 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
HOXC6-202ENST00000394331 TOPAZ1Q8N9V7 1692 aa22.74■■□□□ 1.23
HOXC6-202ENST00000394331 ZGPATQ8N5A5 531 aaKnown RBP22.74■■□□□ 1.23
HOXC6-202ENST00000394331 DNAJC2Q99543 621 aaKnown RBP22.74■■□□□ 1.23
HOXC6-202ENST00000394331 SLFN14P0C7P3 912 aa22.74■■□□□ 1.23
HOXC6-202ENST00000394331 IRX5P78411 483 aaPredicted RBP22.74■■□□□ 1.23
HOXC6-202ENST00000394331 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
HOXC6-202ENST00000394331 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
HOXC6-202ENST00000394331 BRD1O95696 1058 aa22.73■■□□□ 1.23
HOXC6-202ENST00000394331 CTNNA3Q9UI47 895 aa22.73■■□□□ 1.23
HOXC6-202ENST00000394331 NUTM2FA1L443 756 aa22.72■■□□□ 1.23
HOXC6-202ENST00000394331 TTC12Q9H892 705 aaPredicted RBP22.72■■□□□ 1.23
HOXC6-202ENST00000394331 DCTPP1Q9H773 170 aa22.72■■□□□ 1.23
HOXC6-202ENST00000394331 DDX41Q9UJV9 622 aaKnown RBP22.72■■□□□ 1.23
HOXC6-202ENST00000394331 ADCY5O95622 1261 aa22.71■■□□□ 1.23
HOXC6-202ENST00000394331 CREBRFQ8IUR6 639 aa22.71■■□□□ 1.23
HOXC6-202ENST00000394331 MORC2Q9Y6X9 1032 aaPredicted RBP22.71■■□□□ 1.23
HOXC6-202ENST00000394331 PTPRCP08575 1304 aa22.71■■□□□ 1.23
HOXC6-202ENST00000394331 SSH2Q76I76 1423 aa22.71■■□□□ 1.23
HOXC6-202ENST00000394331 MCM10Q7L590 875 aa22.71■■□□□ 1.23
HOXC6-202ENST00000394331 FAM177BA6PVY3 158 aa22.7■■□□□ 1.22
HOXC6-202ENST00000394331 ARHGEF10O15013 1369 aa22.7■■□□□ 1.22
HOXC6-202ENST00000394331 GSPT1P15170 499 aaKnown RBP22.7■■□□□ 1.22
HOXC6-202ENST00000394331 RPAP2Q8IXW5 612 aaPredicted RBP22.7■■□□□ 1.22
HOXC6-202ENST00000394331 SLC26A8Q96RN1 970 aa22.7■■□□□ 1.22
HOXC6-202ENST00000394331 USP25Q9UHP3 1055 aa22.69■■□□□ 1.22
HOXC6-202ENST00000394331 ANKRD44Q8N8A2 993 aa22.69■■□□□ 1.22
HOXC6-202ENST00000394331 PTPRUQ92729 1446 aa22.69■■□□□ 1.22
HOXC6-202ENST00000394331 NCBP1Q09161 790 aaKnown RBP22.68■■□□□ 1.22
HOXC6-202ENST00000394331 TIGD1Q96MW7 591 aa22.68■■□□□ 1.22
HOXC6-202ENST00000394331 TBX22Q9Y458 520 aa22.68■■□□□ 1.22
HOXC6-202ENST00000394331 NALCNQ8IZF0 1738 aa22.68■■□□□ 1.22
HOXC6-202ENST00000394331 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
HOXC6-202ENST00000394331 MCM2P49736 904 aa22.68■■□□□ 1.22
HOXC6-202ENST00000394331 VGLL3A8MV65 326 aa22.67■■□□□ 1.22
HOXC6-202ENST00000394331 KRT24Q2M2I5 525 aa22.67■■□□□ 1.22
HOXC6-202ENST00000394331 C17orf53Q8N3J3 647 aaPredicted RBP22.67■■□□□ 1.22
HOXC6-202ENST00000394331 MAP3K19Q56UN5 1328 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms