RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 SYCP1Q15431 976 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 SUGP1Q8IWZ8 645 aaKnown RBP13.59□□□□□ -0.23
LAMB1-203ENST00000393560 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 TSPAN18Q96SJ8 248 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 ARMC3Q5W041 872 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 RTEL1-TNFRSF6BF6WH68 1400 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 ANKRD33BA6NCL7 494 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
LAMB1-203ENST00000393560 MAGEA9P43362 315 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 KIF1BPQ96EK5 621 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 ETAA1Q9NY74 926 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 BIN2Q9UBW5 565 aaPredicted RBP13.58□□□□□ -0.24
LAMB1-203ENST00000393560 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 SMC3Q9UQE7 1217 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 PSMD2Q13200 908 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
LAMB1-203ENST00000393560 ZNF397Q8NF99 534 aaPredicted RBP13.58□□□□□ -0.24
LAMB1-203ENST00000393560 ERCC4Q92889 916 aaPredicted RBP13.58□□□□□ -0.24
LAMB1-203ENST00000393560 SUDS3Q9H7L9 328 aaPredicted RBP13.58□□□□□ -0.24
LAMB1-203ENST00000393560 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 ROCK2O75116 1388 aaKnown RBP13.57□□□□□ -0.24
LAMB1-203ENST00000393560 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
LAMB1-203ENST00000393560 GGT6Q6P531 493 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 KLHL23Q8NBE8 558 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 FAXDC2Q96IV6 333 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 CEP89Q96ST8 783 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 ACRBPQ8NEB7 543 aa13.57□□□□□ -0.24
LAMB1-203ENST00000393560 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
LAMB1-203ENST00000393560 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 TPD52L2O43399 206 aaKnown RBP13.56□□□□□ -0.24
LAMB1-203ENST00000393560 FAM163BP0C2L3 166 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 SSFA2P28290 1259 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 GOLGA6CA6NDK9 693 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 GOLGA6BA6NDN3 693 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 POLR3GO15318 223 aaPredicted RBP13.56□□□□□ -0.24
LAMB1-203ENST00000393560 GOLGA6DP0CG33 693 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 TRIM74Q86UV6 250 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 CCDC146Q8IYE0 955 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
LAMB1-203ENST00000393560 GOLGA6AQ9NYA3 693 aa13.56□□□□□ -0.24
LAMB1-203ENST00000393560 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
LAMB1-203ENST00000393560 ABCD1P33897 745 aa13.55□□□□□ -0.24
LAMB1-203ENST00000393560 AP1ARQ63HQ0 302 aa13.55□□□□□ -0.24
LAMB1-203ENST00000393560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
LAMB1-203ENST00000393560 TATDN2Q93075 761 aa13.55□□□□□ -0.24
LAMB1-203ENST00000393560 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
LAMB1-203ENST00000393560 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
LAMB1-203ENST00000393560 ZNF232Q9UNY5 417 aa13.55□□□□□ -0.24
LAMB1-203ENST00000393560 UHRF1BP1Q6BDS2 1440 aa13.55□□□□□ -0.24
LAMB1-203ENST00000393560 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
LAMB1-203ENST00000393560 DDX46Q7L014 1031 aaKnown RBP13.55□□□□□ -0.24
LAMB1-203ENST00000393560 MAGI2Q86UL8 1455 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 SYCE3A1L190 88 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 IRX1P78414 480 aaPredicted RBP13.54□□□□□ -0.24
LAMB1-203ENST00000393560 ST5P78524 1137 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 KANK1Q14678 1352 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 A2MP01023 1474 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 TPM1P09493 284 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 C22orf23Q9BZE7 217 aa13.54□□□□□ -0.24
LAMB1-203ENST00000393560 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 INO80Q9ULG1 1556 aaPredicted RBP13.53□□□□□ -0.24
LAMB1-203ENST00000393560 KINO60870 393 aaKnown RBP13.53□□□□□ -0.24
LAMB1-203ENST00000393560 SMC2O95347 1197 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
LAMB1-203ENST00000393560 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
LAMB1-203ENST00000393560 SKILP12757 684 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 PAX3P23760 479 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 MAF1Q9H063 256 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.24
LAMB1-203ENST00000393560 KDM5CP41229 1560 aa13.53□□□□□ -0.24
LAMB1-203ENST00000393560 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.24
LAMB1-203ENST00000393560 NRDCO43847 1150 aa13.52□□□□□ -0.24
LAMB1-203ENST00000393560 FAM69CQ0P6D2 419 aa13.52□□□□□ -0.24
LAMB1-203ENST00000393560 MIEF2Q96C03 454 aa13.52□□□□□ -0.24
LAMB1-203ENST00000393560 PICK1Q9NRD5 415 aa13.52□□□□□ -0.24
LAMB1-203ENST00000393560 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.52□□□□□ -0.24
LAMB1-203ENST00000393560 V9GYY5 206 aaPredicted RBP13.52□□□□□ -0.24
LAMB1-203ENST00000393560 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
LAMB1-203ENST00000393560 ADCY2Q08462 1091 aa13.52□□□□□ -0.25
LAMB1-203ENST00000393560 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
LAMB1-203ENST00000393560 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.25
LAMB1-203ENST00000393560 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.25
LAMB1-203ENST00000393560 MNAT1P51948 309 aa13.51□□□□□ -0.25
LAMB1-203ENST00000393560 FBXO18Q8NFZ0 1043 aa13.51□□□□□ -0.25
LAMB1-203ENST00000393560 IGHDP01880 384 aa13.51□□□□□ -0.25
LAMB1-203ENST00000393560 PPM1EQ8WY54 764 aa13.51□□□□□ -0.25
LAMB1-203ENST00000393560 GOPCQ9HD26 462 aa13.51□□□□□ -0.25
LAMB1-203ENST00000393560 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
LAMB1-203ENST00000393560 E9PCH4 1651 aa13.5□□□□□ -0.25
LAMB1-203ENST00000393560 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
LAMB1-203ENST00000393560 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
LAMB1-203ENST00000393560 SMC5Q8IY18 1101 aa13.5□□□□□ -0.25
LAMB1-203ENST00000393560 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms