RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 TEFQ10587 303 aa33.38■■■□□ 2.93
HOMER3-202ENST00000392351 THUMPD2Q9BTF0 503 aaKnown RBP33.37■■■□□ 2.93
HOMER3-202ENST00000392351 TRIM35Q9UPQ4 493 aa33.37■■■□□ 2.93
HOMER3-202ENST00000392351 APBA3O96018 575 aa33.36■■■□□ 2.93
HOMER3-202ENST00000392351 RGPD3A6NKT7 1758 aaPredicted RBP33.32■■■□□ 2.92
HOMER3-202ENST00000392351 RGPD4Q7Z3J3 1758 aa33.32■■■□□ 2.92
HOMER3-202ENST00000392351 SALL2Q9Y467 1007 aaPredicted RBP33.31■■■□□ 2.92
HOMER3-202ENST00000392351 PAPPAQ13219 1627 aa33.3■■■□□ 2.92
HOMER3-202ENST00000392351 BAG6P46379 1132 aa33.3■■■□□ 2.92
HOMER3-202ENST00000392351 ASAP1Q9ULH1 1129 aa33.29■■■□□ 2.92
HOMER3-202ENST00000392351 LY75O60449 1722 aa33.29■■■□□ 2.92
HOMER3-202ENST00000392351 DEFB132Q7Z7B7 95 aa33.28■■■□□ 2.92
HOMER3-202ENST00000392351 CCDC27Q2M243 656 aa33.27■■■□□ 2.92
HOMER3-202ENST00000392351 ATG3Q9NT62 314 aa33.26■■■□□ 2.92
HOMER3-202ENST00000392351 PALLDQ8WX93 1383 aa33.26■■■□□ 2.92
HOMER3-202ENST00000392351 PLSCR1O15162 318 aa33.26■■■□□ 2.91
HOMER3-202ENST00000392351 EN1Q05925 392 aaPredicted RBP33.26■■■□□ 2.91
HOMER3-202ENST00000392351 NCBP3Q53F19 620 aaKnown RBP33.26■■■□□ 2.91
HOMER3-202ENST00000392351 TAF7Q15545 349 aaPredicted RBP33.25■■■□□ 2.91
HOMER3-202ENST00000392351 SMARCC1Q92922 1105 aaPredicted RBP33.25■■■□□ 2.91
HOMER3-202ENST00000392351 BTBD11A6QL63 1104 aa33.24■■■□□ 2.91
HOMER3-202ENST00000392351 SLC39A6Q13433 755 aa33.24■■■□□ 2.91
HOMER3-202ENST00000392351 WWC1Q8IX03 1113 aa33.24■■■□□ 2.91
HOMER3-202ENST00000392351 UBR2Q8IWV8 1755 aa33.23■■■□□ 2.91
HOMER3-202ENST00000392351 NGEFQ8N5V2 710 aa33.23■■■□□ 2.91
HOMER3-202ENST00000392351 KDM3BQ7LBC6 1761 aa33.23■■■□□ 2.91
HOMER3-202ENST00000392351 CAMKK2Q96RR4 588 aa33.21■■■□□ 2.91
HOMER3-202ENST00000392351 EZH2Q15910 746 aaKnown RBP33.2■■■□□ 2.91
HOMER3-202ENST00000392351 MIS18AQ9NYP9 233 aa33.2■■■□□ 2.91
HOMER3-202ENST00000392351 RREB1Q92766 1687 aa33.19■■■□□ 2.9
HOMER3-202ENST00000392351 CALD1Q05682 793 aaKnown RBP33.19■■■□□ 2.9
HOMER3-202ENST00000392351 ZNF790Q6PG37 636 aa33.19■■■□□ 2.9
HOMER3-202ENST00000392351 TTC5Q8N0Z6 440 aa33.19■■■□□ 2.9
HOMER3-202ENST00000392351 KCPQ6ZWJ8 1503 aa33.18■■■□□ 2.9
HOMER3-202ENST00000392351 LAS1LQ9Y4W2 734 aaKnown RBP33.17■■■□□ 2.9
HOMER3-202ENST00000392351 PTCD1O75127 700 aaKnown RBP33.17■■■□□ 2.9
HOMER3-202ENST00000392351 TXNRD1Q16881 649 aa33.17■■■□□ 2.9
HOMER3-202ENST00000392351 RBM42Q9BTD8 480 aaKnown RBP33.16■■■□□ 2.9
HOMER3-202ENST00000392351 KCNQ3O43525 872 aa33.15■■■□□ 2.9
HOMER3-202ENST00000392351 PROM2Q8N271 834 aa33.15■■■□□ 2.9
HOMER3-202ENST00000392351 TSPYL4Q9UJ04 414 aa33.15■■■□□ 2.9
HOMER3-202ENST00000392351 LOC102724428A0A0B4J2F2 783 aa33.14■■■□□ 2.9
HOMER3-202ENST00000392351 SIK1P57059 783 aa33.14■■■□□ 2.9
HOMER3-202ENST00000392351 HNRNPUQ00839 825 aaKnown RBP eCLIP33.14■■■□□ 2.9
HOMER3-202ENST00000392351 CCNL1Q9UK58 526 aaPredicted RBP33.14■■■□□ 2.9
HOMER3-202ENST00000392351 NUP188Q5SRE5 1749 aa33.14■■■□□ 2.9
HOMER3-202ENST00000392351 ZNF831Q5JPB2 1677 aa33.13■■■□□ 2.89
HOMER3-202ENST00000392351 TAF1LQ8IZX4 1826 aa33.13■■■□□ 2.89
HOMER3-202ENST00000392351 KCNQ4P56696 695 aa33.13■■■□□ 2.89
HOMER3-202ENST00000392351 CFAP44Q96MT7 982 aa33.13■■■□□ 2.89
HOMER3-202ENST00000392351 SLC27A3Q5K4L6 730 aa33.12■■■□□ 2.89
HOMER3-202ENST00000392351 IFT57Q9NWB7 429 aa33.12■■■□□ 2.89
HOMER3-202ENST00000392351 BABAM1Q9NWV8 329 aa33.12■■■□□ 2.89
HOMER3-202ENST00000392351 C5P01031 1676 aa33.11■■■□□ 2.89
HOMER3-202ENST00000392351 CHL1O00533 1208 aa33.11■■■□□ 2.89
HOMER3-202ENST00000392351 WDR63Q8IWG1 891 aa33.11■■■□□ 2.89
HOMER3-202ENST00000392351 ZNF496Q96IT1 587 aaPredicted RBP33.11■■■□□ 2.89
HOMER3-202ENST00000392351 ZNF521Q96K83 1311 aa33.11■■■□□ 2.89
HOMER3-202ENST00000392351 GNAI1P63096 354 aa33.1■■■□□ 2.89
HOMER3-202ENST00000392351 LRRC4BQ9NT99 713 aa33.1■■■□□ 2.89
HOMER3-202ENST00000392351 TJP1Q07157 1748 aa33.09■■■□□ 2.89
HOMER3-202ENST00000392351 SLC4A9Q96Q91 983 aa33.09■■■□□ 2.89
HOMER3-202ENST00000392351 IL16Q14005 1332 aa33.09■■■□□ 2.89
HOMER3-202ENST00000392351 ZNF853P0CG23 659 aa33.09■■■□□ 2.89
HOMER3-202ENST00000392351 ATP6V1AP38606 617 aa33.09■■■□□ 2.89
HOMER3-202ENST00000392351 CICQ96RK0 1608 aaPredicted RBP33.08■■■□□ 2.89
HOMER3-202ENST00000392351 FMNL2Q96PY5 1086 aa33.08■■■□□ 2.89
HOMER3-202ENST00000392351 MBIPQ9NS73 344 aa33.07■■■□□ 2.88
HOMER3-202ENST00000392351 HEG1Q9ULI3 1381 aa33.06■■■□□ 2.88
HOMER3-202ENST00000392351 COL5A3P25940 1745 aaPredicted RBP33.06■■■□□ 2.88
HOMER3-202ENST00000392351 EIF4A1P60842 406 aaKnown RBP33.04■■■□□ 2.88
HOMER3-202ENST00000392351 ITPK1Q13572 414 aa33.04■■■□□ 2.88
HOMER3-202ENST00000392351 VSIG10Q8N0Z9 540 aa33.03■■■□□ 2.88
HOMER3-202ENST00000392351 TSR2Q969E8 191 aaKnown RBP33.01■■■□□ 2.88
HOMER3-202ENST00000392351 SPINK5Q9NQ38 1064 aaPredicted RBP33.01■■■□□ 2.88
HOMER3-202ENST00000392351 C4BP0C0L5 1744 aa33.01■■■□□ 2.87
HOMER3-202ENST00000392351 GOLGA2Q08379 1002 aa33■■■□□ 2.87
HOMER3-202ENST00000392351 DNAJC10Q8IXB1 793 aa33■■■□□ 2.87
HOMER3-202ENST00000392351 LAMB4A4D0S4 1761 aa32.99■■■□□ 2.87
HOMER3-202ENST00000392351 LINC00116Q8NCU8 138 aa32.99■■■□□ 2.87
HOMER3-202ENST00000392351 SNRPA1P09661 255 aaKnown RBP32.97■■■□□ 2.87
HOMER3-202ENST00000392351 FANCIQ9NVI1 1328 aa32.97■■■□□ 2.87
HOMER3-202ENST00000392351 PRAMEF22A3QJZ6 481 aa32.96■■■□□ 2.87
HOMER3-202ENST00000392351 MYH14Q7Z406 1995 aaKnown RBP32.96■■■□□ 2.87
HOMER3-202ENST00000392351 HMGB2P26583 209 aaKnown RBP32.96■■■□□ 2.87
HOMER3-202ENST00000392351 KRT24Q2M2I5 525 aa32.96■■■□□ 2.87
HOMER3-202ENST00000392351 MYH16Q9H6N6 1097 aa32.96■■■□□ 2.87
HOMER3-202ENST00000392351 ZBED9Q6R2W3 1325 aa32.95■■■□□ 2.87
HOMER3-202ENST00000392351 GIGYF1O75420 1035 aaPredicted RBP32.95■■■□□ 2.86
HOMER3-202ENST00000392351 TEX13AQ9BXU3 409 aaPredicted RBP32.94■■■□□ 2.86
HOMER3-202ENST00000392351 ANO8Q9HCE9 1232 aaPredicted RBP32.94■■■□□ 2.86
HOMER3-202ENST00000392351 CDCA7LQ96GN5 454 aa32.93■■■□□ 2.86
HOMER3-202ENST00000392351 E9PSI1 815 aa32.92■■■□□ 2.86
HOMER3-202ENST00000392351 TUBGCP6Q96RT7 1819 aa32.92■■■□□ 2.86
HOMER3-202ENST00000392351 CYP19A1P11511 503 aaPredicted RBP32.92■■■□□ 2.86
HOMER3-202ENST00000392351 NBPF14Q5TI25 921 aa32.92■■■□□ 2.86
HOMER3-202ENST00000392351 USP16Q9Y5T5 823 aa32.92■■■□□ 2.86
HOMER3-202ENST00000392351 STARD3NLO95772 234 aa32.91■■■□□ 2.86
HOMER3-202ENST00000392351 SLFN5Q08AF3 891 aa32.91■■■□□ 2.86
HOMER3-202ENST00000392351 ZNF827Q17R98 1081 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms