RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ZKSCAN5Q9Y2L8 839 aa21.94■■□□□ 1.1
ERCC2-201ENST00000391941 METP08581 1390 aa21.94■■□□□ 1.1
ERCC2-201ENST00000391941 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
ERCC2-201ENST00000391941 ESYT1Q9BSJ8 1104 aa21.93■■□□□ 1.1
ERCC2-201ENST00000391941 TSPYL4Q9UJ04 414 aa21.93■■□□□ 1.1
ERCC2-201ENST00000391941 PRR36Q9H6K5 1346 aa21.93■■□□□ 1.1
ERCC2-201ENST00000391941 CPA1P15085 419 aa21.93■■□□□ 1.1
ERCC2-201ENST00000391941 DDX54Q8TDD1 881 aaKnown RBP21.93■■□□□ 1.1
ERCC2-201ENST00000391941 PLCB2Q00722 1185 aa21.93■■□□□ 1.1
ERCC2-201ENST00000391941 PRDM10Q9NQV6 1147 aa21.93■■□□□ 1.1
ERCC2-201ENST00000391941 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
ERCC2-201ENST00000391941 MTHFSDQ2M296 383 aaKnown RBP21.9■■□□□ 1.1
ERCC2-201ENST00000391941 BRD1O95696 1058 aa21.9■■□□□ 1.1
ERCC2-201ENST00000391941 USP48Q86UV5 1035 aa21.9■■□□□ 1.1
ERCC2-201ENST00000391941 USP25Q9UHP3 1055 aa21.9■■□□□ 1.1
ERCC2-201ENST00000391941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.9■■□□□ 1.1
ERCC2-201ENST00000391941 MX1P20591 662 aa21.89■■□□□ 1.1
ERCC2-201ENST00000391941 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.1
ERCC2-201ENST00000391941 DLC1Q96QB1 1528 aa21.89■■□□□ 1.1
ERCC2-201ENST00000391941 TTC12Q9H892 705 aaPredicted RBP21.89■■□□□ 1.09
ERCC2-201ENST00000391941 PTPRCP08575 1304 aa21.89■■□□□ 1.09
ERCC2-201ENST00000391941 CHMLP26374 656 aa21.89■■□□□ 1.09
ERCC2-201ENST00000391941 DNTTIP2Q5QJE6 756 aaKnown RBP21.89■■□□□ 1.09
ERCC2-201ENST00000391941 LRRFIP2Q9Y608 721 aaKnown RBP21.89■■□□□ 1.09
ERCC2-201ENST00000391941 ZNF500O60304 480 aaPredicted RBP21.88■■□□□ 1.09
ERCC2-201ENST00000391941 RICTORQ6R327 1708 aa21.88■■□□□ 1.09
ERCC2-201ENST00000391941 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
ERCC2-201ENST00000391941 CNPY2Q9Y2B0 182 aa21.88■■□□□ 1.09
ERCC2-201ENST00000391941 NUTM2GQ5VZR2 741 aa21.87■■□□□ 1.09
ERCC2-201ENST00000391941 LRRCC1Q9C099 1032 aa21.87■■□□□ 1.09
ERCC2-201ENST00000391941 TSPY26PQ9H489 355 aa21.87■■□□□ 1.09
ERCC2-201ENST00000391941 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
ERCC2-201ENST00000391941 HMMRO75330 724 aa21.86■■□□□ 1.09
ERCC2-201ENST00000391941 HS1BP3Q53T59 392 aa21.86■■□□□ 1.09
ERCC2-201ENST00000391941 GNAI2P04899 355 aa21.86■■□□□ 1.09
ERCC2-201ENST00000391941 A2ML1A8K2U0 1454 aa21.85■■□□□ 1.09
ERCC2-201ENST00000391941 KIAA0232Q92628 1395 aa21.85■■□□□ 1.09
ERCC2-201ENST00000391941 HCLS1P14317 486 aaPredicted RBP21.85■■□□□ 1.09
ERCC2-201ENST00000391941 PLPPR3Q6T4P5 718 aa21.85■■□□□ 1.09
ERCC2-201ENST00000391941 CHMP3Q9Y3E7 222 aa21.84■■□□□ 1.09
ERCC2-201ENST00000391941 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
ERCC2-201ENST00000391941 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
ERCC2-201ENST00000391941 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
ERCC2-201ENST00000391941 SRCIN1Q9C0H9 1055 aa21.84■■□□□ 1.09
ERCC2-201ENST00000391941 OSBPL3Q9H4L5 887 aa21.84■■□□□ 1.09
ERCC2-201ENST00000391941 LTV1Q96GA3 475 aaPredicted RBP21.83■■□□□ 1.09
ERCC2-201ENST00000391941 FIBPO43427 364 aa21.83■■□□□ 1.08
ERCC2-201ENST00000391941 RTF1Q92541 710 aaKnown RBP21.83■■□□□ 1.08
ERCC2-201ENST00000391941 CCDC39Q9UFE4 941 aa21.83■■□□□ 1.08
ERCC2-201ENST00000391941 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
ERCC2-201ENST00000391941 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
ERCC2-201ENST00000391941 ACEP12821 1306 aa21.82■■□□□ 1.08
ERCC2-201ENST00000391941 FLIIQ13045 1269 aa21.82■■□□□ 1.08
ERCC2-201ENST00000391941 RIMS1Q86UR5 1692 aaKnown RBP21.82■■□□□ 1.08
ERCC2-201ENST00000391941 BCL11BQ9C0K0 894 aaPredicted RBP21.81■■□□□ 1.08
ERCC2-201ENST00000391941 PODXL2Q9NZ53 605 aa21.81■■□□□ 1.08
ERCC2-201ENST00000391941 RASEFQ8IZ41 740 aa21.81■■□□□ 1.08
ERCC2-201ENST00000391941 SALL3Q9BXA9 1300 aa21.81■■□□□ 1.08
ERCC2-201ENST00000391941 CUL4AQ13619 759 aa21.81■■□□□ 1.08
ERCC2-201ENST00000391941 MBD3O95983 291 aa21.8■■□□□ 1.08
ERCC2-201ENST00000391941 PHAXQ9H814 394 aaKnown RBP21.8■■□□□ 1.08
ERCC2-201ENST00000391941 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
ERCC2-201ENST00000391941 TCHHQ07283 1943 aa21.8■■□□□ 1.08
ERCC2-201ENST00000391941 LARGE1O95461 756 aa21.8■■□□□ 1.08
ERCC2-201ENST00000391941 COL9A3Q14050 684 aaPredicted RBP21.8■■□□□ 1.08
ERCC2-201ENST00000391941 CRB1P82279 1406 aa21.8■■□□□ 1.08
ERCC2-201ENST00000391941 ANXA1P04083 346 aa21.79■■□□□ 1.08
ERCC2-201ENST00000391941 GIMAP6Q6P9H5 292 aa21.79■■□□□ 1.08
ERCC2-201ENST00000391941 SETD1AO15047 1707 aaKnown RBP21.78■■□□□ 1.08
ERCC2-201ENST00000391941 MCCP23508 829 aa21.78■■□□□ 1.08
ERCC2-201ENST00000391941 STK31Q9BXU1 1019 aa21.78■■□□□ 1.08
ERCC2-201ENST00000391941 CCT4P50991 539 aaKnown RBP21.78■■□□□ 1.08
ERCC2-201ENST00000391941 CWC27Q6UX04 472 aaKnown RBP21.78■■□□□ 1.08
ERCC2-201ENST00000391941 SURF6O75683 361 aaKnown RBP21.77■■□□□ 1.08
ERCC2-201ENST00000391941 ADCY5O95622 1261 aa21.77■■□□□ 1.08
ERCC2-201ENST00000391941 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.08
ERCC2-201ENST00000391941 EIF2S2P20042 333 aaKnown RBP21.76■■□□□ 1.07
ERCC2-201ENST00000391941 SPC24Q8NBT2 197 aa21.76■■□□□ 1.07
ERCC2-201ENST00000391941 RPAP1Q9BWH6 1393 aaPredicted RBP21.76■■□□□ 1.07
ERCC2-201ENST00000391941 AP5Z1O43299 807 aa21.76■■□□□ 1.07
ERCC2-201ENST00000391941 KIAA2012Q0VF49 1180 aa21.76■■□□□ 1.07
ERCC2-201ENST00000391941 MCM2P49736 904 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 TERF1P54274 439 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 AK2P54819 239 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 USP44Q9H0E7 712 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 MON2Q7Z3U7 1717 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 FAM173BQ6P4H8 233 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 SASS6Q6UVJ0 657 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 EYA1Q99502 592 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 C3P01024 1663 aa21.75■■□□□ 1.07
ERCC2-201ENST00000391941 ATP8B2P98198 1209 aa21.74■■□□□ 1.07
ERCC2-201ENST00000391941 NRKQ7Z2Y5 1582 aa21.74■■□□□ 1.07
ERCC2-201ENST00000391941 RUFY3Q7L099 469 aa21.73■■□□□ 1.07
ERCC2-201ENST00000391941 PPP1R42Q7Z4L9 355 aa21.73■■□□□ 1.07
ERCC2-201ENST00000391941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.73■■□□□ 1.07
ERCC2-201ENST00000391941 SYT1P21579 422 aa21.73■■□□□ 1.07
ERCC2-201ENST00000391941 CCDC83Q8IWF9 413 aa21.73■■□□□ 1.07
ERCC2-201ENST00000391941 SLC26A8Q96RN1 970 aa21.73■■□□□ 1.07
ERCC2-201ENST00000391941 SNX14Q9Y5W7 946 aa21.73■■□□□ 1.07
ERCC2-201ENST00000391941 TCEANC2Q96MN5 208 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms