RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 NCOA3Q9Y6Q9 1424 aa14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 HAP1P54257 671 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 ARHGEF10O15013 1369 aa14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 TOPAZ1Q8N9V7 1692 aa14.4□□□□□ -0.1
RAPGEF3-201ENST00000389212 TTC21AQ8NDW8 1320 aa14.39□□□□□ -0.11
RAPGEF3-201ENST00000389212 KIAA1211Q6ZU35 1233 aa14.39□□□□□ -0.11
RAPGEF3-201ENST00000389212 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
RAPGEF3-201ENST00000389212 IGSF1Q8N6C5 1336 aa14.39□□□□□ -0.11
RAPGEF3-201ENST00000389212 HOXC9P31274 260 aa14.39□□□□□ -0.11
RAPGEF3-201ENST00000389212 TBX22Q9Y458 520 aa14.39□□□□□ -0.11
RAPGEF3-201ENST00000389212 KIF24Q5T7B8 1368 aa14.38□□□□□ -0.11
RAPGEF3-201ENST00000389212 FLIIQ13045 1269 aa14.38□□□□□ -0.11
RAPGEF3-201ENST00000389212 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
RAPGEF3-201ENST00000389212 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
RAPGEF3-201ENST00000389212 PNMA6EA0A0J9YXQ4 647 aa14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 RAB3GAP1Q15042 981 aa14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 RGPD1P0DJD0 1748 aa14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 DDX11L8A8MPP1 907 aa14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 AK9Q5TCS8 1911 aa14.37□□□□□ -0.11
RAPGEF3-201ENST00000389212 DIP2AQ14689 1571 aa14.36□□□□□ -0.11
RAPGEF3-201ENST00000389212 SETD1BQ9UPS6 1966 aaKnown RBP14.36□□□□□ -0.11
RAPGEF3-201ENST00000389212 NALCNQ8IZF0 1738 aa14.36□□□□□ -0.11
RAPGEF3-201ENST00000389212 ESPNB1AK53 854 aa14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 EIF2S2P20042 333 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 PKP1Q13835 747 aa14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 THEMISQ8N1K5 641 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 HMMRO75330 724 aa14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 GNAI2P04899 355 aa14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 PHAXQ9H814 394 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 KDRP35968 1356 aa14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 CCT4P50991 539 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 PDE1AP54750 535 aa14.35□□□□□ -0.11
RAPGEF3-201ENST00000389212 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 CHMP4AQ9BY43 222 aa14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 ANXA1P04083 346 aa14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 XPCQ01831 940 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 CHAMP1Q96JM3 812 aa14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
RAPGEF3-201ENST00000389212 TPM2P07951 284 aa14.33□□□□□ -0.11
RAPGEF3-201ENST00000389212 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.11
RAPGEF3-201ENST00000389212 ZGPATQ8N5A5 531 aaKnown RBP14.33□□□□□ -0.11
RAPGEF3-201ENST00000389212 RABEP1Q15276 862 aa14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 IL1RAPL2Q9NP60 686 aa14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 CASC1Q6TDU7 716 aa14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 GAS2L3Q86XJ1 694 aa14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF3-201ENST00000389212 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
RAPGEF3-201ENST00000389212 TRIM6-TRIM34B2RNG4 842 aa14.32□□□□□ -0.12
RAPGEF3-201ENST00000389212 LGR6Q9HBX8 967 aa14.32□□□□□ -0.12
RAPGEF3-201ENST00000389212 KCNQ3O43525 872 aa14.32□□□□□ -0.12
RAPGEF3-201ENST00000389212 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
RAPGEF3-201ENST00000389212 MAP4K4O95819 1239 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF3-201ENST00000389212 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
RAPGEF3-201ENST00000389212 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF3-201ENST00000389212 LMOD2Q6P5Q4 547 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 MAP3K5Q99683 1374 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 DNTTIP2Q5QJE6 756 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 UNC5CLQ8IV45 518 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 LRRCC1Q9C099 1032 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 ERC2O15083 957 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 MCTP1Q6DN14 999 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 GRPEL1Q9HAV7 217 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
RAPGEF3-201ENST00000389212 ARHGAP23Q9P227 1491 aa14.29□□□□□ -0.12
RAPGEF3-201ENST00000389212 R3HCC1Q9Y3T6 440 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-201ENST00000389212 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-201ENST00000389212 ESCO1Q5FWF5 840 aa14.29□□□□□ -0.12
RAPGEF3-201ENST00000389212 IPO4Q8TEX9 1081 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-201ENST00000389212 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
RAPGEF3-201ENST00000389212 MX1P20591 662 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 SLIT1O75093 1534 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 REC8O95072 547 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 GNAI3P08754 354 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 PALD1Q9ULE6 856 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 ANO2Q9NQ90 1003 aa14.28□□□□□ -0.12
RAPGEF3-201ENST00000389212 NEK4P51957 841 aa14.27□□□□□ -0.12
RAPGEF3-201ENST00000389212 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.12
RAPGEF3-201ENST00000389212 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.12
RAPGEF3-201ENST00000389212 CHPF2Q9P2E5 772 aa14.27□□□□□ -0.13
RAPGEF3-201ENST00000389212 ST18O60284 1047 aa14.26□□□□□ -0.13
RAPGEF3-201ENST00000389212 PSME1Q06323 249 aa14.26□□□□□ -0.13
RAPGEF3-201ENST00000389212 IL25Q9H293 177 aa14.26□□□□□ -0.13
RAPGEF3-201ENST00000389212 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
RAPGEF3-201ENST00000389212 MRE11P49959 708 aa14.26□□□□□ -0.13
RAPGEF3-201ENST00000389212 HTATSF1O43719 755 aaKnown RBP14.26□□□□□ -0.13
RAPGEF3-201ENST00000389212 SURF6O75683 361 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms