RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SWAP70Q9UH65 585 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 RAD50Q92878 1312 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 TRPM2O94759 1503 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 GPATCH8Q9UKJ3 1502 aaKnown RBP5.74□□□□□ -1.49
PTPRD-203ENST00000381196 FMNL3Q8IVF7 1028 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 KIF18AQ8NI77 898 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 PRDM11Q9NQV5 511 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 RBM26Q5T8P6 1007 aaKnown RBP5.74□□□□□ -1.49
PTPRD-203ENST00000381196 SHTN1A0MZ66 631 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 ALDH1L2Q3SY69 923 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 ERC2O15083 957 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 RUBCNQ92622 972 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 NOL7Q9UMY1 257 aaKnown RBP5.74□□□□□ -1.49
PTPRD-203ENST00000381196 ZFYVE9O95405 1425 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 FYB1O15117 783 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 ERLIN2O94905 339 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 DHX37Q8IY37 1157 aaKnown RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 GIMAP7Q8NHV1 300 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 SCAND2PQ9GZW5 306 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 ZC3H13Q5T200 1668 aaKnown RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 TRIM6-TRIM34B2RNG4 842 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 K7ELQ4 463 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 SLC20A2Q08357 652 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC183Q5T5S1 534 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC73Q6ZRK6 1079 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 SYNE3Q6ZMZ3 975 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC47Q96A33 483 aaKnown RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 C9orf78Q9NZ63 289 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 ZNF500O60304 480 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 HOOK3Q86VS8 718 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 ATP10AO60312 1499 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 NLRP6P59044 892 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 RBM42Q9BTD8 480 aaKnown RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 YY1AP1Q9H869 796 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 SMTNL1A8MU46 457 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 EIF2S2P20042 333 aaKnown RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 NUTM2GQ5VZR2 741 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 FRMPD1Q5SYB0 1578 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 CPLX2Q6PUV4 134 aaKnown RBP5.73□□□□□ -1.49
PTPRD-203ENST00000381196 RUNDC1Q96C34 613 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 RPGRIP1LQ68CZ1 1315 aa5.73□□□□□ -1.49
PTPRD-203ENST00000381196 ITGB1BP2Q9UKP3 347 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 MADDQ8WXG6 1647 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 MYOM2P54296 1465 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC30Q5VVM6 783 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 DZIP1LQ8IYY4 767 aaKnown RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 CFAP45Q9UL16 551 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 BUB1BO60566 1050 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 SLFNL1Q499Z3 407 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 DNAJC21Q5F1R6 531 aaKnown RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 PRG4Q92954 1404 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC27Q2M243 656 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 MAP1BP46821 2468 aaKnown RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 CEP128Q6ZU80 1094 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 TOM1L2Q6ZVM7 507 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 PPM1EQ8WY54 764 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 RPGRIP1Q96KN7 1286 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 STMN4Q9H169 189 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 KRT32Q14532 448 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 CEP57L1Q8IYX8 460 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 SAMD9LQ8IVG5 1584 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 MYO3AQ8NEV4 1616 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 AOX1Q06278 1338 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 TMCO3Q6UWJ1 677 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 PLCD4Q9BRC7 762 aa5.72□□□□□ -1.49
PTPRD-203ENST00000381196 R3HCC1Q9Y3T6 440 aaKnown RBP5.72□□□□□ -1.49
PTPRD-203ENST00000381196 SETBP1Q9Y6X0 1596 aa5.71□□□□□ -1.49
PTPRD-203ENST00000381196 ANKRD26Q9UPS8 1709 aa5.71□□□□□ -1.49
PTPRD-203ENST00000381196 MPHOSPH10O00566 681 aaKnown RBP5.71□□□□□ -1.49
PTPRD-203ENST00000381196 INTS4Q96HW7 963 aaKnown RBP5.71□□□□□ -1.49
PTPRD-203ENST00000381196 ZKSCAN5Q9Y2L8 839 aa5.71□□□□□ -1.49
PTPRD-203ENST00000381196 A0A1B0GUA9 196 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 H0YHG0 523 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 NDC80O14777 642 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 GDAP1L1Q96MZ0 367 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 MYCBPQ99417 103 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-203ENST00000381196 DDX19AQ9NUU7 478 aaKnown RBP5.71□□□□□ -1.5
PTPRD-203ENST00000381196 NSD3Q9BZ95 1437 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 BMP2KLQ5H9B9 411 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 ARMC9Q7Z3E5 817 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 ZNF397Q8NF99 534 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-203ENST00000381196 GIGYF2Q6Y7W6 1299 aaKnown RBP5.71□□□□□ -1.5
PTPRD-203ENST00000381196 KIF6Q6ZMV9 814 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 SMC5Q8IY18 1101 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 GZF1Q9H116 711 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-203ENST00000381196 B4GALNT4Q76KP1 1039 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 ANKRD18AQ8IVF6 992 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 MAGI2Q86UL8 1455 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 UBAP1LF5GYI3 381 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 ARHGAP25P42331 645 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 ABTB2Q8N961 1025 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 IPO4Q8TEX9 1081 aaKnown RBP5.71□□□□□ -1.5
PTPRD-203ENST00000381196 NGLY1Q96IV0 654 aa5.71□□□□□ -1.5
PTPRD-203ENST00000381196 MAGI3Q5TCQ9 1506 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 A0A1B0GUL7 405 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 KIF3CO14782 793 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 TATP17735 454 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-203ENST00000381196 GNAI1P63096 354 aa5.7□□□□□ -1.5
PTPRD-203ENST00000381196 SPATA24Q86W54 205 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms