RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	HTATSF1	O43719	755 aa	Known RBP	12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	TMPO	P42166	694 aa	Known RBP	12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	RIPK4	P57078	832 aa		12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	EN1	Q05925	392 aa	Predicted RBP	12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	NEUROD2	Q15784	382 aa		12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	NFATC2IP	Q8NCF5	419 aa		12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	IL17RE	Q8NFR9	667 aa		12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	PIGB	Q92521	554 aa		12.06	□□□□□ -0.48
MSL3-205	ENST00000380692	MAP3K5	Q99683	1374 aa		12.05	□□□□□ -0.48
MSL3-205	ENST00000380692	PLSCR1	O15162	318 aa		12.05	□□□□□ -0.48
MSL3-205	ENST00000380692	RRP7A	Q9Y3A4	280 aa	Known RBP	12.05	□□□□□ -0.48
MSL3-205	ENST00000380692	PKD1L3	Q7Z443	1732 aa		12.04	□□□□□ -0.48
MSL3-205	ENST00000380692	APAF1	O14727	1248 aa		12.04	□□□□□ -0.48
MSL3-205	ENST00000380692	TEF	Q10587	303 aa		12.04	□□□□□ -0.48
MSL3-205	ENST00000380692	MCM10	Q7L590	875 aa		12.04	□□□□□ -0.48
MSL3-205	ENST00000380692	SLC52A2	Q9HAB3	445 aa		12.04	□□□□□ -0.48
MSL3-205	ENST00000380692	KDM6A	O15550	1401 aa	Predicted RBP	12.03	□□□□□ -0.48
MSL3-205	ENST00000380692	DCTN1	Q14203	1278 aa		12.03	□□□□□ -0.48
MSL3-205	ENST00000380692	EZH2	Q15910	746 aa	Known RBP	12.03	□□□□□ -0.48
MSL3-205	ENST00000380692	SMARCC1	Q92922	1105 aa	Predicted RBP	12.03	□□□□□ -0.48
MSL3-205	ENST00000380692	CAMKK2	Q96RR4	588 aa		12.03	□□□□□ -0.48
MSL3-205	ENST00000380692	LMOD3	Q0VAK6	560 aa		12.02	□□□□□ -0.49
MSL3-205	ENST00000380692	ATG3	Q9NT62	314 aa		12.02	□□□□□ -0.49
MSL3-205	ENST00000380692	ASAP1	Q9ULH1	1129 aa		12.02	□□□□□ -0.49
MSL3-205	ENST00000380692	SHANK3	Q9BYB0	1731 aa		12.01	□□□□□ -0.49
MSL3-205	ENST00000380692	SENP3-EIF4A1	A0A087X0R7	540 aa		12.01	□□□□□ -0.49
MSL3-205	ENST00000380692	TXNRD1	Q16881	649 aa		12.01	□□□□□ -0.49
MSL3-205	ENST00000380692	PROM2	Q8N271	834 aa		12.01	□□□□□ -0.49
MSL3-205	ENST00000380692	TAF7	Q15545	349 aa	Predicted RBP	12	□□□□□ -0.49
MSL3-205	ENST00000380692	THUMPD2	Q9BTF0	503 aa	Known RBP	12	□□□□□ -0.49
MSL3-205	ENST00000380692	CEMIP	Q8WUJ3	1361 aa		12	□□□□□ -0.49
MSL3-205	ENST00000380692	BTBD11	A6QL63	1104 aa		11.99	□□□□□ -0.49
MSL3-205	ENST00000380692	SLC39A6	Q13433	755 aa		11.99	□□□□□ -0.49
MSL3-205	ENST00000380692	RBM42	Q9BTD8	480 aa	Known RBP	11.99	□□□□□ -0.49
MSL3-205	ENST00000380692	CCNL1	Q9UK58	526 aa	Predicted RBP	11.99	□□□□□ -0.49
MSL3-205	ENST00000380692	TRIM35	Q9UPQ4	493 aa		11.99	□□□□□ -0.49
MSL3-205	ENST00000380692	PALLD	Q8WX93	1383 aa		11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	PTCD1	O75127	700 aa	Known RBP	11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	KCNQ4	P56696	695 aa		11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	SLC27A3	Q5K4L6	730 aa		11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	TTC5	Q8N0Z6	440 aa		11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	SALL2	Q9Y467	1007 aa	Predicted RBP	11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	KAT6B	Q8WYB5	2073 aa		11.98	□□□□□ -0.49
MSL3-205	ENST00000380692	LOC102724428	A0A0B4J2F2	783 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	HMGB2	P26583	209 aa	Known RBP	11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	SIK1	P57059	783 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	NBPF14	Q5TI25	921 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	ZNF790	Q6PG37	636 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	MIS18A	Q9NYP9	233 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	DOT1L	Q8TEK3	1739 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	NHS	Q6T4R5	1651 aa		11.97	□□□□□ -0.49
MSL3-205	ENST00000380692	SBF2	Q86WG5	1849 aa		11.96	□□□□□ -0.49
MSL3-205	ENST00000380692	ATP6V1A	P38606	617 aa		11.96	□□□□□ -0.49
MSL3-205	ENST00000380692	LRRC4B	Q9NT99	713 aa		11.96	□□□□□ -0.49
MSL3-205	ENST00000380692	LAS1L	Q9Y4W2	734 aa	Known RBP	11.96	□□□□□ -0.49
MSL3-205	ENST00000380692	EP400	Q96L91	3159 aa		11.95	□□□□□ -0.5
MSL3-205	ENST00000380692	KCNQ3	O43525	872 aa		11.95	□□□□□ -0.5
MSL3-205	ENST00000380692	CALD1	Q05682	793 aa	Known RBP	11.95	□□□□□ -0.5
MSL3-205	ENST00000380692	CCDC27	Q2M243	656 aa		11.95	□□□□□ -0.5
MSL3-205	ENST00000380692	NGEF	Q8N5V2	710 aa		11.95	□□□□□ -0.5
MSL3-205	ENST00000380692	TOGARAM1	Q9Y4F4	1720 aa		11.94	□□□□□ -0.5
MSL3-205	ENST00000380692	WWC1	Q8IX03	1113 aa		11.94	□□□□□ -0.5
MSL3-205	ENST00000380692	TSPYL4	Q9UJ04	414 aa		11.94	□□□□□ -0.5
MSL3-205	ENST00000380692	TNS1	Q9HBL0	1735 aa	Known RBP	11.94	□□□□□ -0.5
MSL3-205	ENST00000380692	ZNF496	Q96IT1	587 aa	Predicted RBP	11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	FMNL2	Q96PY5	1086 aa		11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	SLC4A9	Q96Q91	983 aa		11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	BABAM1	Q9NWV8	329 aa		11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	STK32B	Q9NY57	414 aa		11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	MRC1	P22897	1456 aa		11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	BTAF1	O14981	1849 aa		11.93	□□□□□ -0.5
MSL3-205	ENST00000380692	CHL1	O00533	1208 aa		11.92	□□□□□ -0.5
MSL3-205	ENST00000380692	ITPK1	Q13572	414 aa		11.92	□□□□□ -0.5
MSL3-205	ENST00000380692	VSIG10	Q8N0Z9	540 aa		11.92	□□□□□ -0.5
MSL3-205	ENST00000380692	CFAP44	Q96MT7	982 aa		11.92	□□□□□ -0.5
MSL3-205	ENST00000380692	SCN11A	Q9UI33	1791 aa		11.92	□□□□□ -0.5
MSL3-205	ENST00000380692	ADAMTS7	Q9UKP4	1686 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	ITGB4	P16144	1822 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	GNAI1	P63096	354 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	SLC15A2	Q16348	729 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	WDR63	Q8IWG1	891 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	DNAJC10	Q8IXB1	793 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	LINC00116	Q8NCU8	138 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	TFCP2L1	Q9NZI6	479 aa		11.91	□□□□□ -0.5
MSL3-205	ENST00000380692	SNRPA1	P09661	255 aa	Known RBP	11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	EIF4A1	P60842	406 aa	Known RBP	11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	R3HDM1	Q15032	1099 aa	Known RBP	11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	AKT1S1	Q96B36	256 aa		11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	AK7	Q96M32	723 aa		11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	IFT57	Q9NWB7	429 aa		11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.9	□□□□□ -0.5
MSL3-205	ENST00000380692	STARD3NL	O95772	234 aa		11.89	□□□□□ -0.51
MSL3-205	ENST00000380692	ZNF853	P0CG23	659 aa		11.89	□□□□□ -0.51
MSL3-205	ENST00000380692	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.89	□□□□□ -0.51
MSL3-205	ENST00000380692	MBIP	Q9NS73	344 aa		11.89	□□□□□ -0.51
MSL3-205	ENST00000380692	USP16	Q9Y5T5	823 aa		11.89	□□□□□ -0.51
MSL3-205	ENST00000380692	HEG1	Q9ULI3	1381 aa		11.89	□□□□□ -0.51
MSL3-205	ENST00000380692	PSD	A5PKW4	1024 aa	Predicted RBP	11.88	□□□□□ -0.51
MSL3-205	ENST00000380692	GIGYF1	O75420	1035 aa	Predicted RBP	11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms