RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 CSB-PGBD3P0DP91 1061 aa12.15□□□□□ -0.46
PMS2-202ENST00000380416 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
PMS2-202ENST00000380416 ARHGEF25Q86VW2 580 aa12.15□□□□□ -0.46
PMS2-202ENST00000380416 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
PMS2-202ENST00000380416 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
PMS2-202ENST00000380416 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
PMS2-202ENST00000380416 CCDC7Q96M83 1385 aa12.14□□□□□ -0.47
PMS2-202ENST00000380416 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
PMS2-202ENST00000380416 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
PMS2-202ENST00000380416 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
PMS2-202ENST00000380416 COG3Q96JB2 828 aa12.12□□□□□ -0.47
PMS2-202ENST00000380416 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
PMS2-202ENST00000380416 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
PMS2-202ENST00000380416 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
PMS2-202ENST00000380416 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
PMS2-202ENST00000380416 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
PMS2-202ENST00000380416 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
PMS2-202ENST00000380416 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
PMS2-202ENST00000380416 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
PMS2-202ENST00000380416 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
PMS2-202ENST00000380416 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
PMS2-202ENST00000380416 KCNQ4P56696 695 aa12.09□□□□□ -0.47
PMS2-202ENST00000380416 GSE1Q14687 1217 aa12.09□□□□□ -0.47
PMS2-202ENST00000380416 ERBB3P21860 1342 aa12.09□□□□□ -0.47
PMS2-202ENST00000380416 C5P01031 1676 aa12.08□□□□□ -0.48
PMS2-202ENST00000380416 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
PMS2-202ENST00000380416 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
PMS2-202ENST00000380416 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
PMS2-202ENST00000380416 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
PMS2-202ENST00000380416 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
PMS2-202ENST00000380416 DOT1LQ8TEK3 1739 aa12.07□□□□□ -0.48
PMS2-202ENST00000380416 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
PMS2-202ENST00000380416 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
PMS2-202ENST00000380416 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
PMS2-202ENST00000380416 GGNBP2Q9H3C7 697 aa12.06□□□□□ -0.48
PMS2-202ENST00000380416 KIF13BQ9NQT8 1826 aa12.06□□□□□ -0.48
PMS2-202ENST00000380416 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 PLEKHG2Q9H7P9 1386 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 FYB1O15117 783 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 AMPHP49418 695 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 IP6K1Q92551 441 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 TOGARAM1Q9Y4F4 1720 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 MAP3K19Q56UN5 1328 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 NSD2O96028 1365 aa12.05□□□□□ -0.48
PMS2-202ENST00000380416 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
PMS2-202ENST00000380416 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
PMS2-202ENST00000380416 PRDM10Q9NQV6 1147 aa12.04□□□□□ -0.48
PMS2-202ENST00000380416 ANKRD26Q9UPS8 1709 aa12.03□□□□□ -0.48
PMS2-202ENST00000380416 HOXC9P31274 260 aa12.03□□□□□ -0.48
PMS2-202ENST00000380416 SMC1BQ8NDV3 1235 aa12.03□□□□□ -0.48
PMS2-202ENST00000380416 LTV1Q96GA3 475 aaPredicted RBP12.03□□□□□ -0.48
PMS2-202ENST00000380416 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
PMS2-202ENST00000380416 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
PMS2-202ENST00000380416 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
PMS2-202ENST00000380416 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
PMS2-202ENST00000380416 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.48
PMS2-202ENST00000380416 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.48
PMS2-202ENST00000380416 IL2RBP14784 551 aa12.02□□□□□ -0.49
PMS2-202ENST00000380416 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
PMS2-202ENST00000380416 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
PMS2-202ENST00000380416 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
PMS2-202ENST00000380416 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
PMS2-202ENST00000380416 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
PMS2-202ENST00000380416 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
PMS2-202ENST00000380416 ARFGEF1Q9Y6D6 1849 aa12□□□□□ -0.49
PMS2-202ENST00000380416 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
PMS2-202ENST00000380416 FBLN1P23142 703 aa12□□□□□ -0.49
PMS2-202ENST00000380416 RASEFQ8IZ41 740 aa12□□□□□ -0.49
PMS2-202ENST00000380416 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
PMS2-202ENST00000380416 KDM2BQ8NHM5 1336 aa12□□□□□ -0.49
PMS2-202ENST00000380416 FLT4P35916 1363 aa12□□□□□ -0.49
PMS2-202ENST00000380416 KIF24Q5T7B8 1368 aa12□□□□□ -0.49
PMS2-202ENST00000380416 FOXN1O15353 648 aa11.99□□□□□ -0.49
PMS2-202ENST00000380416 RGS19P49795 217 aa11.99□□□□□ -0.49
PMS2-202ENST00000380416 CLCN6P51797 869 aa11.99□□□□□ -0.49
PMS2-202ENST00000380416 ABHD8Q96I13 439 aa11.99□□□□□ -0.49
PMS2-202ENST00000380416 C4BP0C0L5 1744 aa11.98□□□□□ -0.49
PMS2-202ENST00000380416 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
PMS2-202ENST00000380416 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
PMS2-202ENST00000380416 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
PMS2-202ENST00000380416 INSRP06213 1382 aa11.97□□□□□ -0.49
PMS2-202ENST00000380416 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
PMS2-202ENST00000380416 PANK3Q9H999 370 aa11.97□□□□□ -0.49
PMS2-202ENST00000380416 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
PMS2-202ENST00000380416 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.49
PMS2-202ENST00000380416 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
PMS2-202ENST00000380416 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
PMS2-202ENST00000380416 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.49
PMS2-202ENST00000380416 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
PMS2-202ENST00000380416 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
PMS2-202ENST00000380416 SBF1O95248 1867 aa11.95□□□□□ -0.5
PMS2-202ENST00000380416 TNRC18O15417 2968 aaPredicted RBP11.95□□□□□ -0.5
PMS2-202ENST00000380416 HSP90AB2PQ58FF8 381 aa11.95□□□□□ -0.5
PMS2-202ENST00000380416 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
PMS2-202ENST00000380416 MEGF6O75095 1541 aa11.95□□□□□ -0.5
PMS2-202ENST00000380416 CTCFP49711 727 aaPredicted RBP11.94□□□□□ -0.5
PMS2-202ENST00000380416 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
PMS2-202ENST00000380416 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
PMS2-202ENST00000380416 RAPGEF4Q8WZA2 1011 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms