RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 USP25Q9UHP3 1055 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 SMC3Q9UQE7 1217 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 SKIDA1Q1XH10 827 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 MYO6Q9UM54 1294 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 ZNF526Q8TF50 670 aaPredicted RBP4.81□□□□□ -1.64
PTAR1-202ENST00000377200 CDCA7LQ96GN5 454 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC34Q96HJ3 373 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 SLIT1O75093 1534 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 KIAA1328Q86T90 577 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 SKAP1Q86WV1 359 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 SIRT1Q96EB6 747 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 CPSF2Q9P2I0 782 aaKnown RBP4.81□□□□□ -1.64
PTAR1-202ENST00000377200 BRD4O60885 1362 aaPredicted RBP4.81□□□□□ -1.64
PTAR1-202ENST00000377200 MICALL1Q8N3F8 863 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 NSD2O96028 1365 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 ABCC11Q96J66 1382 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 MPHOSPH10O00566 681 aaKnown RBP4.81□□□□□ -1.64
PTAR1-202ENST00000377200 FAM135BQ49AJ0 1406 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 DYDC1Q8WWB3 177 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 INCENPQ9NQS7 918 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 TAOK2Q9UL54 1235 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC73Q6ZRK6 1079 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 LRRFIP2Q9Y608 721 aaKnown RBP4.81□□□□□ -1.64
PTAR1-202ENST00000377200 SF3A1Q15459 793 aaKnown RBP4.8□□□□□ -1.64
PTAR1-202ENST00000377200 ZSCAN23Q3MJ62 389 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 TMEM132EQ6IEE7 984 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 ASXL1Q8IXJ9 1541 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 ANKRD20A12PQ8NF67 263 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC184Q52MB2 194 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 CNPY4Q8N129 248 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 PRAM1Q96QH2 718 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 NAT10Q9H0A0 1025 aaKnown RBP4.8□□□□□ -1.64
PTAR1-202ENST00000377200 VPS37CA5D8V6 355 aaPredicted RBP4.8□□□□□ -1.64
PTAR1-202ENST00000377200 POTEB2H3BUK9 544 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 NEMFO60524 1076 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 GBP6Q6ZN66 633 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 TBX22Q9Y458 520 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 U2AF2P26368 475 aaKnown RBP eCLIP4.8□□□□□ -1.647e-7■■□□□ 14.3
PTAR1-202ENST00000377200 PANK3Q9H999 370 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 CEBPAP49715 358 aaPredicted RBP4.8□□□□□ -1.64
PTAR1-202ENST00000377200 TMX1Q9H3N1 280 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 MRVI1Q9Y6F6 885 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 ADGRB1O14514 1584 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 H3BQV1 296 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 PDE3AQ14432 1141 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 IFFO2Q5TF58 517 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 STK31Q9BXU1 1019 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 CHMP3Q9Y3E7 222 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 SMC2O95347 1197 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 GBP2P32456 591 aaPredicted RBP4.8□□□□□ -1.64
PTAR1-202ENST00000377200 MAP2K2P36507 400 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 KRBA2Q6ZNG9 492 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 PANK1Q8TE04 598 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 TESK2Q96S53 571 aa4.8□□□□□ -1.64
PTAR1-202ENST00000377200 KIF18AQ8NI77 898 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 ARID4AP29374 1257 aaPredicted RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 ATP6V1AP38606 617 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 MCM2P49736 904 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 BRMS1Q9HCU9 246 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 NPC1L1Q9UHC9 1359 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 MINK1Q8N4C8 1332 aaPredicted RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 SAFB2Q14151 953 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 C8orf34Q49A92 452 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 CEP135Q66GS9 1140 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 DISP3Q9P2K9 1392 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 SMTNL1A8MU46 457 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 ZNF500O60304 480 aaPredicted RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 TMCO5BA8MYB1 307 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 SETSIPP0DME0 302 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 RPAINQ86UA6 219 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 BCL2L13Q9BXK5 485 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 WDR33Q9C0J8 1336 aaKnown RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 ADCY5O95622 1261 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 CAGE1Q8TC20 777 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 SMARCC1Q92922 1105 aaPredicted RBP4.79□□□□□ -1.64
PTAR1-202ENST00000377200 PTPRMP28827 1452 aa4.79□□□□□ -1.64
PTAR1-202ENST00000377200 C16orf45Q96MC5 204 aaPredicted RBP4.78□□□□□ -1.64
PTAR1-202ENST00000377200 LRRCC1Q9C099 1032 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 TSR1Q2NL82 804 aaKnown RBP4.78□□□□□ -1.64
PTAR1-202ENST00000377200 CHMP4CQ96CF2 233 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 DMRT2Q9Y5R5 561 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 ARHGAP23Q9P227 1491 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC171Q6TFL3 1326 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 KIF20BQ96Q89 1820 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 GOLGA6L10A6NI86 522 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 ANO2Q9NQ90 1003 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 CPS1P31327 1500 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 AP1ARQ63HQ0 302 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 PDILTQ8N807 584 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 APAF1O14727 1248 aa4.78□□□□□ -1.64
PTAR1-202ENST00000377200 IPO7O95373 1038 aaKnown RBP4.78□□□□□ -1.64
PTAR1-202ENST00000377200 RNF187Q5TA31 235 aaPredicted RBP4.78□□□□□ -1.64
PTAR1-202ENST00000377200 ZNF692Q9BU19 519 aaPredicted RBP4.78□□□□□ -1.64
PTAR1-202ENST00000377200 A0A1B0GUA9 196 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms