RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 FSD2A1L4K1 749 aa15.78■□□□□ 0.12
USP11-204ENST00000377107 MPNDQ8N594 471 aa15.78■□□□□ 0.12
USP11-204ENST00000377107 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
USP11-204ENST00000377107 LGR6Q9HBX8 967 aa15.77■□□□□ 0.12
USP11-204ENST00000377107 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.12
USP11-204ENST00000377107 FLT4P35916 1363 aa15.77■□□□□ 0.12
USP11-204ENST00000377107 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.12
USP11-204ENST00000377107 USP6P35125 1406 aa15.77■□□□□ 0.11
USP11-204ENST00000377107 KCNQ3O43525 872 aa15.77■□□□□ 0.11
USP11-204ENST00000377107 HOXC9P31274 260 aa15.77■□□□□ 0.11
USP11-204ENST00000377107 PALD1Q9ULE6 856 aa15.77■□□□□ 0.11
USP11-204ENST00000377107 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
USP11-204ENST00000377107 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
USP11-204ENST00000377107 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
USP11-204ENST00000377107 PLCB2Q00722 1185 aa15.76■□□□□ 0.11
USP11-204ENST00000377107 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
USP11-204ENST00000377107 PI4KAP2A4QPH2 592 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 PI4KAP1Q8N8J0 262 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 SRCIN1Q9C0H9 1055 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 ESPNB1AK53 854 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 KCNJ4P48050 445 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
USP11-204ENST00000377107 TMX3Q96JJ7 454 aa15.75■□□□□ 0.11
USP11-204ENST00000377107 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
USP11-204ENST00000377107 CWC27Q6UX04 472 aaKnown RBP15.74■□□□□ 0.11
USP11-204ENST00000377107 KIAA1211Q6ZU35 1233 aa15.74■□□□□ 0.11
USP11-204ENST00000377107 SETD1BQ9UPS6 1966 aaKnown RBP15.74■□□□□ 0.11
USP11-204ENST00000377107 ESYT1Q9BSJ8 1104 aa15.74■□□□□ 0.11
USP11-204ENST00000377107 DDIT3P35638 169 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 AK9Q5TCS8 1911 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 ATP10DQ9P241 1426 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 NBPF7P0C2Y1 421 aaPredicted RBP15.73■□□□□ 0.11
USP11-204ENST00000377107 ATP8B2P98198 1209 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 SYCE3A1L190 88 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
USP11-204ENST00000377107 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 CPA1P15085 419 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 SIL1Q9H173 461 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 BTBD11A6QL63 1104 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 PTMSP20962 102 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
USP11-204ENST00000377107 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
USP11-204ENST00000377107 SBNO1A3KN83 1393 aa15.71■□□□□ 0.11
USP11-204ENST00000377107 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
USP11-204ENST00000377107 CHMLP26374 656 aa15.71■□□□□ 0.11
USP11-204ENST00000377107 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
USP11-204ENST00000377107 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
USP11-204ENST00000377107 CDC42BPGQ6DT37 1551 aa15.71■□□□□ 0.1
USP11-204ENST00000377107 PTMAP06454 111 aaKnown RBP15.71■□□□□ 0.1
USP11-204ENST00000377107 MSNP26038 577 aaKnown RBP15.71■□□□□ 0.1
USP11-204ENST00000377107 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.1
USP11-204ENST00000377107 C1orf141Q5JVX7 400 aa15.71■□□□□ 0.1
USP11-204ENST00000377107 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.1
USP11-204ENST00000377107 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
USP11-204ENST00000377107 DLC1Q96QB1 1528 aa15.7■□□□□ 0.1
USP11-204ENST00000377107 CRB1P82279 1406 aa15.7■□□□□ 0.1
USP11-204ENST00000377107 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
USP11-204ENST00000377107 PIP4K2AP48426 406 aaPredicted RBP15.69■□□□□ 0.1
USP11-204ENST00000377107 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
USP11-204ENST00000377107 ADAMTS13Q76LX8 1427 aa15.69■□□□□ 0.1
USP11-204ENST00000377107 PRIM1P49642 420 aaKnown RBP15.69■□□□□ 0.1
USP11-204ENST00000377107 RGS12O14924 1447 aa15.69■□□□□ 0.1
USP11-204ENST00000377107 CWC22Q9HCG8 908 aaKnown RBP15.69■□□□□ 0.1
USP11-204ENST00000377107 DIAPH3Q9NSV4 1193 aa15.69■□□□□ 0.1
USP11-204ENST00000377107 MYL6BP14649 208 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 RHPN1Q8TCX5 695 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 NSFL1CQ9UNZ2 370 aaKnown RBP15.68■□□□□ 0.1
USP11-204ENST00000377107 ERBB4Q15303 1308 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
USP11-204ENST00000377107 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 LMBRD1Q9NUN5 540 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 PRAMEF22A3QJZ6 481 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 DNAAF4Q8WXU2 420 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 ARID3AQ99856 593 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 IL25Q9H293 177 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
USP11-204ENST00000377107 OVOS2A0A0J9YW53 1432 aa15.67■□□□□ 0.1
USP11-204ENST00000377107 OVOS2Q6IE36 1432 aa15.67■□□□□ 0.1
USP11-204ENST00000377107 ARHGEF10O15013 1369 aa15.67■□□□□ 0.1
USP11-204ENST00000377107 MAP3K5Q99683 1374 aa15.67■□□□□ 0.1
USP11-204ENST00000377107 IFIT2P09913 472 aaKnown RBP15.67■□□□□ 0.1
USP11-204ENST00000377107 TAOK2Q9UL54 1235 aa15.67■□□□□ 0.1
USP11-204ENST00000377107 SPATA31D1Q6ZQQ2 1576 aa15.67■□□□□ 0.1
USP11-204ENST00000377107 NCOA3Q9Y6Q9 1424 aa15.66■□□□□ 0.1
USP11-204ENST00000377107 KIF24Q5T7B8 1368 aa15.66■□□□□ 0.1
USP11-204ENST00000377107 RBSNQ9H1K0 784 aa15.66■□□□□ 0.1
USP11-204ENST00000377107 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
USP11-204ENST00000377107 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 SLC39A6Q13433 755 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 MAP3K2Q9Y2U5 619 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 DLG5Q8TDM6 1919 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 DIP2BQ9P265 1576 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 GPT2Q8TD30 523 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 ORAI2Q96SN7 254 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms