RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 SMARCC1Q92922 1105 aaPredicted RBP22.19■■□□□ 1.14
HLA-F-218ENST00000376861 SALL2Q9Y467 1007 aaPredicted RBP22.18■■□□□ 1.14
HLA-F-218ENST00000376861 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
HLA-F-218ENST00000376861 SENP3-EIF4A1A0A087X0R7 540 aa22.17■■□□□ 1.14
HLA-F-218ENST00000376861 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
HLA-F-218ENST00000376861 CEMIPQ8WUJ3 1361 aa22.16■■□□□ 1.14
HLA-F-218ENST00000376861 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
HLA-F-218ENST00000376861 EN1Q05925 392 aaPredicted RBP22.16■■□□□ 1.14
HLA-F-218ENST00000376861 TTC5Q8N0Z6 440 aa22.16■■□□□ 1.14
HLA-F-218ENST00000376861 ADAMTS7Q9UKP4 1686 aa22.15■■□□□ 1.14
HLA-F-218ENST00000376861 BTBD11A6QL63 1104 aa22.15■■□□□ 1.14
HLA-F-218ENST00000376861 PLSCR1O15162 318 aa22.15■■□□□ 1.14
HLA-F-218ENST00000376861 DEFB132Q7Z7B7 95 aa22.15■■□□□ 1.14
HLA-F-218ENST00000376861 NGEFQ8N5V2 710 aa22.15■■□□□ 1.14
HLA-F-218ENST00000376861 TAF7Q15545 349 aaPredicted RBP22.14■■□□□ 1.13
HLA-F-218ENST00000376861 THUMPD2Q9BTF0 503 aaKnown RBP22.14■■□□□ 1.13
HLA-F-218ENST00000376861 ASAP1Q9ULH1 1129 aa22.13■■□□□ 1.13
HLA-F-218ENST00000376861 TRIM35Q9UPQ4 493 aa22.13■■□□□ 1.13
HLA-F-218ENST00000376861 LAS1LQ9Y4W2 734 aaKnown RBP22.13■■□□□ 1.13
HLA-F-218ENST00000376861 MRC1P22897 1456 aa22.13■■□□□ 1.13
HLA-F-218ENST00000376861 PALLDQ8WX93 1383 aa22.13■■□□□ 1.13
HLA-F-218ENST00000376861 HMGB2P26583 209 aaKnown RBP22.11■■□□□ 1.13
HLA-F-218ENST00000376861 RBM42Q9BTD8 480 aaKnown RBP22.11■■□□□ 1.13
HLA-F-218ENST00000376861 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
HLA-F-218ENST00000376861 EZH2Q15910 746 aaKnown RBP22.11■■□□□ 1.13
HLA-F-218ENST00000376861 SLC39A6Q13433 755 aa22.1■■□□□ 1.13
HLA-F-218ENST00000376861 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
HLA-F-218ENST00000376861 PTCD1O75127 700 aaKnown RBP22.09■■□□□ 1.13
HLA-F-218ENST00000376861 TXNRD1Q16881 649 aa22.09■■□□□ 1.13
HLA-F-218ENST00000376861 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
HLA-F-218ENST00000376861 CCNL1Q9UK58 526 aaPredicted RBP22.09■■□□□ 1.13
HLA-F-218ENST00000376861 SIPA1L3O60292 1781 aaPredicted RBP22.09■■□□□ 1.13
HLA-F-218ENST00000376861 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.13
HLA-F-218ENST00000376861 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.13
HLA-F-218ENST00000376861 ZNF790Q6PG37 636 aa22.08■■□□□ 1.13
HLA-F-218ENST00000376861 WWC1Q8IX03 1113 aa22.08■■□□□ 1.13
HLA-F-218ENST00000376861 CAMKK2Q96RR4 588 aa22.08■■□□□ 1.13
HLA-F-218ENST00000376861 TSPYL4Q9UJ04 414 aa22.08■■□□□ 1.13
HLA-F-218ENST00000376861 SLC27A3Q5K4L6 730 aa22.07■■□□□ 1.12
HLA-F-218ENST00000376861 LOC102724428A0A0B4J2F2 783 aa22.06■■□□□ 1.12
HLA-F-218ENST00000376861 SIK1P57059 783 aa22.06■■□□□ 1.12
HLA-F-218ENST00000376861 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
HLA-F-218ENST00000376861 ATP6V1AP38606 617 aa22.06■■□□□ 1.12
HLA-F-218ENST00000376861 LY75O60449 1722 aa22.05■■□□□ 1.12
HLA-F-218ENST00000376861 GNAI1P63096 354 aa22.05■■□□□ 1.12
HLA-F-218ENST00000376861 FMNL2Q96PY5 1086 aa22.05■■□□□ 1.12
HLA-F-218ENST00000376861 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
HLA-F-218ENST00000376861 NBPF14Q5TI25 921 aa22.03■■□□□ 1.12
HLA-F-218ENST00000376861 WDR63Q8IWG1 891 aa22.03■■□□□ 1.12
HLA-F-218ENST00000376861 CFAP44Q96MT7 982 aa22.03■■□□□ 1.12
HLA-F-218ENST00000376861 IFT57Q9NWB7 429 aa22.02■■□□□ 1.12
HLA-F-218ENST00000376861 PAPPAQ13219 1627 aa22.02■■□□□ 1.12
HLA-F-218ENST00000376861 KCNQ4P56696 695 aa22.01■■□□□ 1.11
HLA-F-218ENST00000376861 PROM2Q8N271 834 aa22.01■■□□□ 1.11
HLA-F-218ENST00000376861 KCNQ3O43525 872 aa22■■□□□ 1.11
HLA-F-218ENST00000376861 ZNF496Q96IT1 587 aaPredicted RBP22■■□□□ 1.11
HLA-F-218ENST00000376861 ZNF521Q96K83 1311 aa22■■□□□ 1.11
HLA-F-218ENST00000376861 CHL1O00533 1208 aa21.99■■□□□ 1.11
HLA-F-218ENST00000376861 VSIG10Q8N0Z9 540 aa21.99■■□□□ 1.11
HLA-F-218ENST00000376861 TEX13AQ9BXU3 409 aaPredicted RBP21.99■■□□□ 1.11
HLA-F-218ENST00000376861 RREB1Q92766 1687 aa21.99■■□□□ 1.11
HLA-F-218ENST00000376861 IL16Q14005 1332 aa21.99■■□□□ 1.11
HLA-F-218ENST00000376861 KDM3BQ7LBC6 1761 aa21.98■■□□□ 1.11
HLA-F-218ENST00000376861 UBR2Q8IWV8 1755 aa21.98■■□□□ 1.11
HLA-F-218ENST00000376861 LRRC4BQ9NT99 713 aa21.98■■□□□ 1.11
HLA-F-218ENST00000376861 HEG1Q9ULI3 1381 aa21.98■■□□□ 1.11
HLA-F-218ENST00000376861 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
HLA-F-218ENST00000376861 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
HLA-F-218ENST00000376861 KCPQ6ZWJ8 1503 aa21.97■■□□□ 1.11
HLA-F-218ENST00000376861 STARD3NLO95772 234 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 C5P01031 1676 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 NUP188Q5SRE5 1749 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 EIF4A1P60842 406 aaKnown RBP21.96■■□□□ 1.11
HLA-F-218ENST00000376861 AK7Q96M32 723 aa21.96■■□□□ 1.11
HLA-F-218ENST00000376861 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
HLA-F-218ENST00000376861 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
HLA-F-218ENST00000376861 ZNF853P0CG23 659 aa21.94■■□□□ 1.1
HLA-F-218ENST00000376861 ITPK1Q13572 414 aa21.94■■□□□ 1.1
HLA-F-218ENST00000376861 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
HLA-F-218ENST00000376861 SLC4A9Q96Q91 983 aa21.94■■□□□ 1.1
HLA-F-218ENST00000376861 NPM2Q86SE8 214 aaKnown RBP21.93■■□□□ 1.1
HLA-F-218ENST00000376861 LINC00116Q8NCU8 138 aa21.93■■□□□ 1.1
HLA-F-218ENST00000376861 TFCP2L1Q9NZI6 479 aa21.93■■□□□ 1.1
HLA-F-218ENST00000376861 TSR2Q969E8 191 aaKnown RBP21.92■■□□□ 1.1
HLA-F-218ENST00000376861 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
HLA-F-218ENST00000376861 E9PSI1 815 aa21.9■■□□□ 1.1
HLA-F-218ENST00000376861 GIGYF1O75420 1035 aaPredicted RBP21.9■■□□□ 1.1
HLA-F-218ENST00000376861 GNPATO15228 680 aa21.9■■□□□ 1.1
HLA-F-218ENST00000376861 CRKLP46109 303 aaKnown RBP21.9■■□□□ 1.1
HLA-F-218ENST00000376861 SLC15A2Q16348 729 aa21.9■■□□□ 1.1
HLA-F-218ENST00000376861 TJP1Q07157 1748 aa21.89■■□□□ 1.1
HLA-F-218ENST00000376861 CDCA7LQ96GN5 454 aa21.89■■□□□ 1.09
HLA-F-218ENST00000376861 CHMP4AQ9BY43 222 aa21.89■■□□□ 1.09
HLA-F-218ENST00000376861 FANCIQ9NVI1 1328 aa21.88■■□□□ 1.09
HLA-F-218ENST00000376861 COL5A3P25940 1745 aaPredicted RBP21.88■■□□□ 1.09
HLA-F-218ENST00000376861 CYP19A1P11511 503 aaPredicted RBP21.88■■□□□ 1.09
HLA-F-218ENST00000376861 EIF2S2P20042 333 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms