RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 LMOD3Q0VAK6 560 aa18.7■□□□□ 0.58
MSH5-203ENST00000375750 MCM10Q7L590 875 aa18.7■□□□□ 0.58
MSH5-203ENST00000375750 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
MSH5-203ENST00000375750 RBM27Q9P2N5 1060 aaKnown RBP18.7■□□□□ 0.58
MSH5-203ENST00000375750 ARHGEF10O15013 1369 aa18.7■□□□□ 0.58
MSH5-203ENST00000375750 RGPD1P0DJD0 1748 aa18.7■□□□□ 0.58
MSH5-203ENST00000375750 SDSP20132 328 aa18.7■□□□□ 0.58
MSH5-203ENST00000375750 CALD1Q05682 793 aaKnown RBP18.7■□□□□ 0.58
MSH5-203ENST00000375750 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
MSH5-203ENST00000375750 LMTK3Q96Q04 1460 aa18.69■□□□□ 0.58
MSH5-203ENST00000375750 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
MSH5-203ENST00000375750 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
MSH5-203ENST00000375750 MTHFSDQ2M296 383 aaKnown RBP18.69■□□□□ 0.58
MSH5-203ENST00000375750 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
MSH5-203ENST00000375750 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
MSH5-203ENST00000375750 HSP90AA2PQ14568 343 aaPredicted RBP18.68■□□□□ 0.58
MSH5-203ENST00000375750 MIS18AQ9NYP9 233 aa18.68■□□□□ 0.58
MSH5-203ENST00000375750 GCP02774 474 aa18.68■□□□□ 0.58
MSH5-203ENST00000375750 KLHL40Q2TBA0 621 aa18.68■□□□□ 0.58
MSH5-203ENST00000375750 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
MSH5-203ENST00000375750 CHMP4BQ9H444 224 aaKnown RBP18.68■□□□□ 0.58
MSH5-203ENST00000375750 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 MEIS3Q99687 375 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 RABEP1Q15276 862 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 KCNH5Q8NCM2 988 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 IP6K1Q92551 441 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 LMBRD1Q9NUN5 540 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 KDRP35968 1356 aa18.67■□□□□ 0.58
MSH5-203ENST00000375750 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
MSH5-203ENST00000375750 KIF24Q5T7B8 1368 aa18.66■□□□□ 0.58
MSH5-203ENST00000375750 MST1RQ04912 1400 aa18.66■□□□□ 0.58
MSH5-203ENST00000375750 PRPF40AO75400 957 aaKnown RBP18.66■□□□□ 0.58
MSH5-203ENST00000375750 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
MSH5-203ENST00000375750 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
MSH5-203ENST00000375750 ZSCAN23Q3MJ62 389 aa18.65■□□□□ 0.58
MSH5-203ENST00000375750 ZDHHC9Q9Y397 364 aa18.65■□□□□ 0.58
MSH5-203ENST00000375750 NFAT5O94916 1531 aa18.65■□□□□ 0.58
MSH5-203ENST00000375750 ANKRD44Q8N8A2 993 aa18.64■□□□□ 0.58
MSH5-203ENST00000375750 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.58
MSH5-203ENST00000375750 CCDC173Q0VFZ6 552 aa18.64■□□□□ 0.57
MSH5-203ENST00000375750 CADPS2Q86UW7 1296 aa18.64■□□□□ 0.57
MSH5-203ENST00000375750 CLEC17AQ6ZS10 378 aa18.64■□□□□ 0.57
MSH5-203ENST00000375750 MSH6P52701 1360 aa18.64■□□□□ 0.57
MSH5-203ENST00000375750 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
MSH5-203ENST00000375750 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
MSH5-203ENST00000375750 GPT2Q8TD30 523 aa18.63■□□□□ 0.57
MSH5-203ENST00000375750 PPP1R9BQ96SB3 815 aa18.63■□□□□ 0.57
MSH5-203ENST00000375750 ATP10DQ9P241 1426 aa18.63■□□□□ 0.57
MSH5-203ENST00000375750 ZNF335Q9H4Z2 1342 aaPredicted RBP18.63■□□□□ 0.57
MSH5-203ENST00000375750 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
MSH5-203ENST00000375750 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
MSH5-203ENST00000375750 NOL8Q76FK4 1167 aaKnown RBP18.63■□□□□ 0.57
MSH5-203ENST00000375750 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
MSH5-203ENST00000375750 LTN1O94822 1766 aa18.62■□□□□ 0.57
MSH5-203ENST00000375750 F6X3S4 739 aa18.62■□□□□ 0.57
MSH5-203ENST00000375750 STRCQ7RTU9 1775 aa18.62■□□□□ 0.57
MSH5-203ENST00000375750 KIAA1211Q6ZU35 1233 aa18.62■□□□□ 0.57
MSH5-203ENST00000375750 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
MSH5-203ENST00000375750 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
MSH5-203ENST00000375750 PTMSP20962 102 aa18.61■□□□□ 0.57
MSH5-203ENST00000375750 SLC4A10Q6U841 1118 aa18.61■□□□□ 0.57
MSH5-203ENST00000375750 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
MSH5-203ENST00000375750 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
MSH5-203ENST00000375750 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
MSH5-203ENST00000375750 RGS12O14924 1447 aa18.61■□□□□ 0.57
MSH5-203ENST00000375750 G2E3Q7L622 706 aa18.6■□□□□ 0.57
MSH5-203ENST00000375750 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
MSH5-203ENST00000375750 FOXD4L6Q3SYB3 417 aaPredicted RBP18.6■□□□□ 0.57
MSH5-203ENST00000375750 FOXD4L3Q6VB84 417 aaPredicted RBP18.6■□□□□ 0.57
MSH5-203ENST00000375750 CHL1O00533 1208 aa18.59■□□□□ 0.57
MSH5-203ENST00000375750 NUCB2P80303 420 aa18.59■□□□□ 0.57
MSH5-203ENST00000375750 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
MSH5-203ENST00000375750 AXIN2Q9Y2T1 843 aa18.59■□□□□ 0.57
MSH5-203ENST00000375750 DCCP43146 1447 aa18.59■□□□□ 0.57
MSH5-203ENST00000375750 TRPM3Q9HCF6 1732 aaPredicted RBP18.59■□□□□ 0.57
MSH5-203ENST00000375750 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
MSH5-203ENST00000375750 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
MSH5-203ENST00000375750 ZNF445P59923 1031 aa18.58■□□□□ 0.56
MSH5-203ENST00000375750 CABLES1Q8TDN4 633 aa18.58■□□□□ 0.56
MSH5-203ENST00000375750 KIF1AQ12756 1690 aa18.57■□□□□ 0.56
MSH5-203ENST00000375750 TMEM63CQ9P1W3 806 aa18.57■□□□□ 0.56
MSH5-203ENST00000375750 EXOC6BQ9Y2D4 811 aa18.57■□□□□ 0.56
MSH5-203ENST00000375750 CRB1P82279 1406 aa18.57■□□□□ 0.56
MSH5-203ENST00000375750 RRP9O43818 475 aaKnown RBP18.57■□□□□ 0.56
MSH5-203ENST00000375750 SYCE3A1L190 88 aa18.56■□□□□ 0.56
MSH5-203ENST00000375750 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
MSH5-203ENST00000375750 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
MSH5-203ENST00000375750 SLIT3O75094 1523 aa18.56■□□□□ 0.56
MSH5-203ENST00000375750 ST18O60284 1047 aa18.56■□□□□ 0.56
MSH5-203ENST00000375750 NEK4P51957 841 aa18.56■□□□□ 0.56
MSH5-203ENST00000375750 TPRNQ4KMQ1 711 aa18.56■□□□□ 0.56
MSH5-203ENST00000375750 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
MSH5-203ENST00000375750 MSNP26038 577 aaKnown RBP18.55■□□□□ 0.56
MSH5-203ENST00000375750 RNF214Q8ND24 703 aa18.55■□□□□ 0.56
MSH5-203ENST00000375750 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.55■□□□□ 0.56
MSH5-203ENST00000375750 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
MSH5-203ENST00000375750 ANKRD24Q8TF21 1146 aa18.55■□□□□ 0.56
MSH5-203ENST00000375750 NECTIN2Q92692 538 aa18.55■□□□□ 0.56
MSH5-203ENST00000375750 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
MSH5-203ENST00000375750 ERC2O15083 957 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms