RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 SYCE3A1L190 88 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 ZSCAN25Q6NSZ9 544 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 MCM2P49736 904 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 CCDC113Q9H0I3 377 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 MKNK2Q9HBH9 465 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 IGF1RP08069 1367 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 CWC15Q9P013 229 aaKnown RBP17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 UQCRHP07919 91 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 RANBP6O60518 1105 aaKnown RBP17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 DACH1Q9UI36 760 aa17.25■□□□□ 0.35
NOTCH4-201ENST00000375023 CCDC102AQ96A19 550 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 CCDC96Q2M329 555 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 NUP62CLQ9H1M0 184 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 GRPEL1Q9HAV7 217 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 CUX1P39880 1505 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
NOTCH4-201ENST00000375023 CSPG5O95196 566 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 PIP4K2AP48426 406 aaPredicted RBP17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 CCP110O43303 1012 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
NOTCH4-201ENST00000375023 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
NOTCH4-201ENST00000375023 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
NOTCH4-201ENST00000375023 SEC63Q9UGP8 760 aaKnown RBP17.22■□□□□ 0.35
NOTCH4-201ENST00000375023 TSHZ3Q63HK5 1081 aa17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 FEZ1Q99689 392 aa17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 MACROD2A1Z1Q3 448 aa17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 ZBTB9Q96C00 473 aa17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
NOTCH4-201ENST00000375023 ZRSR2Q15696 482 aaKnown RBP17.21■□□□□ 0.34
NOTCH4-201ENST00000375023 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.34
NOTCH4-201ENST00000375023 STARD3NLO95772 234 aa17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 PLS1Q14651 629 aa17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 RFC4P35249 363 aa17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 CDKL5O76039 1030 aa17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 POLD1P28340 1107 aa17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
NOTCH4-201ENST00000375023 PRG4Q92954 1404 aaPredicted RBP17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 GBP2P32456 591 aaPredicted RBP17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 PDE3AQ14432 1141 aa17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 CTNNBL1Q8WYA6 563 aaPredicted RBP17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 IFIT1P09914 478 aaKnown RBP17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 LUC7LQ9NQ29 371 aaKnown RBP17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
NOTCH4-201ENST00000375023 GPR162Q16538 588 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 ZBTB3Q9H5J0 574 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 MMRN2Q9H8L6 949 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 BCCIPQ9P287 314 aaKnown RBP eCLIP17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 C20orf194Q5TEA3 1177 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 GDPD2Q9HCC8 539 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 PRDM10Q9NQV6 1147 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
NOTCH4-201ENST00000375023 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 NME9Q86XW9 330 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 NAPBQ9H115 298 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 KIF21BO75037 1637 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 ATP5J2-PTCD1G3V325 749 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 BIN1O00499 593 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
NOTCH4-201ENST00000375023 HAND2P61296 217 aa17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 TAF4BQ92750 862 aa17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 TRMT1Q9NXH9 659 aaKnown RBP17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 BACH2Q9BYV9 841 aa17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 AAMPQ13685 434 aa17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 ARHGAP29Q52LW3 1261 aa17.16■□□□□ 0.34
NOTCH4-201ENST00000375023 FOXO3O43524 673 aa17.15■□□□□ 0.34
NOTCH4-201ENST00000375023 NFE2L2Q16236 605 aa17.15■□□□□ 0.34
NOTCH4-201ENST00000375023 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.34
NOTCH4-201ENST00000375023 FBLN1P23142 703 aa17.14■□□□□ 0.34
NOTCH4-201ENST00000375023 ANAPC15P60006 121 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms