RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 KDM5BQ9UGL1 1544 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 SOCS7O14512 581 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 MBD3O95983 291 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 NUP160Q12769 1436 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 SAFBQ15424 915 aaKnown RBP eCLIP7.49□□□□□ -1.21
PTPN3-202ENST00000374541 CCDC57Q2TAC2 916 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-202ENST00000374541 IFT57Q9NWB7 429 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 UGGT2Q9NYU1 1516 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 CAGE1Q8TC20 777 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 DCPSQ96C86 337 aaKnown RBP7.49□□□□□ -1.21
PTPN3-202ENST00000374541 EYA3Q99504 573 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 NYXQ9GZU5 481 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 MCTP1Q6DN14 999 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 SLC3A2P08195 630 aaKnown RBP7.49□□□□□ -1.21
PTPN3-202ENST00000374541 RRP1P56182 461 aaKnown RBP7.49□□□□□ -1.21
PTPN3-202ENST00000374541 TRDNQ13061 729 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 CT47A1Q5JQC4 288 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-202ENST00000374541 OLFM4Q6UX06 510 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 PLCD3Q8N3E9 789 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 TMEM106CQ9BVX2 250 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 GPTP24298 496 aa7.49□□□□□ -1.21
PTPN3-202ENST00000374541 CAVIN4Q5BKX8 364 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
PTPN3-202ENST00000374541 ACEP12821 1306 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 ATP10BO94823 1461 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-202ENST00000374541 SLC4A8Q2Y0W8 1093 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 GJD4Q96KN9 370 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-202ENST00000374541 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
PTPN3-202ENST00000374541 PDE6BP35913 854 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 TAF3Q5VWG9 929 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 CNBD1Q8NA66 436 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 RIPK4P57078 832 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 ODF2Q5BJF6 829 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 ANKRD18AQ8IVF6 992 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 INCENPQ9NQS7 918 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 SMC3Q9UQE7 1217 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 EHBP1L1Q8N3D4 1523 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 PRKG1Q13976 671 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 DALRD3Q5D0E6 543 aaKnown RBP7.48□□□□□ -1.21
PTPN3-202ENST00000374541 SMARCE1Q969G3 411 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 RILPL2Q969X0 211 aa7.48□□□□□ -1.21
PTPN3-202ENST00000374541 SOGA3Q5TF21 947 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 ANKRD45Q5TZF3 282 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 SUPT20HQ8NEM7 779 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 CLUAP1Q96AJ1 413 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 RBM17Q96I25 401 aaKnown RBP7.47□□□□□ -1.21
PTPN3-202ENST00000374541 PPM1FP49593 454 aaPredicted RBP7.47□□□□□ -1.21
PTPN3-202ENST00000374541 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 TNNI2P48788 182 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 RABEP1Q15276 862 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 SULF1Q8IWU6 871 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 RNF181Q9P0P0 153 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 ERICH2A1L162 156 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 ERC2O15083 957 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 ERLIN2O94905 339 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 SLF2Q8IX21 1173 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
PTPN3-202ENST00000374541 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-202ENST00000374541 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.21
PTPN3-202ENST00000374541 FMNL2Q96PY5 1086 aa7.46□□□□□ -1.21
PTPN3-202ENST00000374541 CLASP1Q7Z460 1538 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 FGD6Q6ZV73 1430 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 RIMBP2O15034 1052 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 PRIM1P49642 420 aaKnown RBP7.46□□□□□ -1.22
PTPN3-202ENST00000374541 MCM2P49736 904 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 CFAP74Q9C0B2 1584 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 XBP1P17861 261 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
PTPN3-202ENST00000374541 NIP7Q9Y221 180 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPN3-202ENST00000374541 ERLIN1O75477 346 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 OFD1O75665 1012 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 PAF1Q8N7H5 531 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
PTPN3-202ENST00000374541 IFIT2P09913 472 aaKnown RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 MPHOSPH6Q99547 160 aaKnown RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 KIAA0556O60303 1618 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 KIAA0754O94854 1291 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 C2CD5Q86YS7 1000 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 CCDC30Q5VVM6 783 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 CDC5LQ99459 802 aaKnown RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 HFM1A2PYH4 1435 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 GCP02774 474 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 TSPYL1Q9H0U9 437 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 RAI14Q9P0K7 980 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 PSMA5P28066 241 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 FILIP1LQ4L180 1135 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 ATF7IPQ6VMQ6 1270 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms