RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SPATA31D1Q6ZQQ2 1576 aa8.07□□□□□ -1.12
CHD6-202ENST00000373222 NUDT16Q96DE0 195 aaKnown RBP8.07□□□□□ -1.12
CHD6-202ENST00000373222 BRPF3Q9ULD4 1205 aa8.07□□□□□ -1.12
CHD6-202ENST00000373222 IL13P35225 146 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 CEBPAP49715 358 aaPredicted RBP8.06□□□□□ -1.12
CHD6-202ENST00000373222 LNPKQ9C0E8 428 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 ZBTB40Q9NUA8 1239 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 KIF13AQ9H1H9 1805 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 FCHSD2O94868 740 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 PDE4CQ08493 712 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 C8orf58Q8NAV2 365 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
CHD6-202ENST00000373222 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
CHD6-202ENST00000373222 E2F4Q16254 413 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 CCDC125Q86Z20 511 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 TBC1D32Q96NH3 1257 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 ZMYM3Q14202 1370 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 VAMP4O75379 141 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
CHD6-202ENST00000373222 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
CHD6-202ENST00000373222 DDX19BQ9UMR2 479 aa8.05□□□□□ -1.12
CHD6-202ENST00000373222 RIMS1Q86UR5 1692 aaKnown RBP8.05□□□□□ -1.12
CHD6-202ENST00000373222 CDC42BPGQ6DT37 1551 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 ROBO2Q9HCK4 1378 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 ATP7BP35670 1465 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 GSE1Q14687 1217 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 NFE2L2Q16236 605 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 SLC26A8Q96RN1 970 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 AMOTL2Q9Y2J4 779 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 MON2Q7Z3U7 1717 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.04□□□□□ -1.12
CHD6-202ENST00000373222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.04□□□□□ -1.12
CHD6-202ENST00000373222 LTKP29376 864 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
CHD6-202ENST00000373222 SIRT2Q8IXJ6 389 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 ZNF687Q8N1G0 1237 aa8.04□□□□□ -1.12
CHD6-202ENST00000373222 ZFP91Q96JP5 570 aaPredicted RBP8.04□□□□□ -1.12
CHD6-202ENST00000373222 RGPD8O14715 1765 aaPredicted RBP8.03□□□□□ -1.12
CHD6-202ENST00000373222 DLC1Q96QB1 1528 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
CHD6-202ENST00000373222 TAF7LQ5H9L4 462 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 ZNF710Q8N1W2 664 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 MIS18AQ9NYP9 233 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 IL16Q14005 1332 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 ITSN1Q15811 1721 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 KNDC1Q76NI1 1749 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 EDC4Q6P2E9 1401 aaKnown RBP8.03□□□□□ -1.12
CHD6-202ENST00000373222 AGLP35573 1532 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 C3P01024 1663 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 AKAP12Q02952 1782 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 UNCXA6NJT0 531 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 HDAC1Q13547 482 aaPredicted RBP8.03□□□□□ -1.12
CHD6-202ENST00000373222 MCM6Q14566 821 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 MCM10Q7L590 875 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 SMC5Q8IY18 1101 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
CHD6-202ENST00000373222 COG3Q96JB2 828 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
CHD6-202ENST00000373222 SETD1BQ9UPS6 1966 aaKnown RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 CT47B1P0C2W7 299 aaPredicted RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 HSP90AB2PQ58FF8 381 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 RBM26Q5T8P6 1007 aaKnown RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 AK9Q5TCS8 1911 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 ZBTB7BO15156 539 aaPredicted RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 FOXO3O43524 673 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 EIF4A2Q14240 407 aaKnown RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 TWISTNBQ3B726 338 aaPredicted RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 SULT6B1Q6IMI4 303 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 IGSF5Q9NSI5 407 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 ARIH1Q9Y4X5 557 aaPredicted RBP8.02□□□□□ -1.13
CHD6-202ENST00000373222 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 PEAK1Q9H792 1746 aa8.02□□□□□ -1.13
CHD6-202ENST00000373222 UBR1Q8IWV7 1749 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 ANKRD45Q5TZF3 282 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 C22orf23Q9BZE7 217 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 CDK12Q9NYV4 1490 aaPredicted RBP8.01□□□□□ -1.13
CHD6-202ENST00000373222 ACEP12821 1306 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 ZNF853P0CG23 659 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 NUCB1Q02818 461 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 SMYD5Q6GMV2 418 aa8.01□□□□□ -1.13
CHD6-202ENST00000373222 ALDH1L2Q3SY69 923 aa8□□□□□ -1.13
CHD6-202ENST00000373222 CHD1LQ86WJ1 897 aa8□□□□□ -1.13
CHD6-202ENST00000373222 ADAMTS13Q76LX8 1427 aa8□□□□□ -1.13
CHD6-202ENST00000373222 IPO8O15397 1037 aaKnown RBP8□□□□□ -1.13
CHD6-202ENST00000373222 CD2BP2O95400 341 aaKnown RBP8□□□□□ -1.13
CHD6-202ENST00000373222 AAMPQ13685 434 aa8□□□□□ -1.13
CHD6-202ENST00000373222 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
CHD6-202ENST00000373222 UPF2Q9HAU5 1272 aaKnown RBP8□□□□□ -1.13
CHD6-202ENST00000373222 PTPRUQ92729 1446 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 TNRQ92752 1358 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 GNAI1P63096 354 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 CERS3Q8IU89 383 aa7.99□□□□□ -1.13
CHD6-202ENST00000373222 C16orf71Q8IYS4 520 aaPredicted RBP7.99□□□□□ -1.13
CHD6-202ENST00000373222 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms