RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 GBP4Q96PP9 640 aa12.17□□□□□ -0.46
KDM4A-201ENST00000372396 EYA1Q99502 592 aa12.17□□□□□ -0.46
KDM4A-201ENST00000372396 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
KDM4A-201ENST00000372396 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
KDM4A-201ENST00000372396 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
KDM4A-201ENST00000372396 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 RILPL2Q969X0 211 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 ADGRB1O14514 1584 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 PTPRMP28827 1452 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 PPLO60437 1756 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
KDM4A-201ENST00000372396 ST18O60284 1047 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 USP6P35125 1406 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 CLGNO14967 610 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
KDM4A-201ENST00000372396 MED14O60244 1454 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 ZNF521Q96K83 1311 aa12.16□□□□□ -0.46
KDM4A-201ENST00000372396 PRR36Q9H6K5 1346 aa12.15□□□□□ -0.46
KDM4A-201ENST00000372396 GCP02774 474 aa12.15□□□□□ -0.46
KDM4A-201ENST00000372396 NASPP49321 788 aaPredicted RBP12.15□□□□□ -0.46
KDM4A-201ENST00000372396 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
KDM4A-201ENST00000372396 ANKARQ7Z5J8 1434 aa12.15□□□□□ -0.46
KDM4A-201ENST00000372396 MCM4P33991 863 aa12.15□□□□□ -0.46
KDM4A-201ENST00000372396 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.47
KDM4A-201ENST00000372396 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.47
KDM4A-201ENST00000372396 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.47
KDM4A-201ENST00000372396 ERC2O15083 957 aa12.14□□□□□ -0.47
KDM4A-201ENST00000372396 TRMT2AQ8IZ69 625 aaKnown RBP12.14□□□□□ -0.47
KDM4A-201ENST00000372396 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
KDM4A-201ENST00000372396 VAMP4O75379 141 aa12.14□□□□□ -0.47
KDM4A-201ENST00000372396 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
KDM4A-201ENST00000372396 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
KDM4A-201ENST00000372396 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
KDM4A-201ENST00000372396 TMEM131LA2VDJ0 1609 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
KDM4A-201ENST00000372396 SURF6O75683 361 aaKnown RBP12.13□□□□□ -0.47
KDM4A-201ENST00000372396 HSPA2P54652 639 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 SASS6Q6UVJ0 657 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 HDAC1Q13547 482 aaPredicted RBP12.13□□□□□ -0.47
KDM4A-201ENST00000372396 TMEM51Q9NW97 253 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 CHMP5Q9NZZ3 219 aa12.13□□□□□ -0.47
KDM4A-201ENST00000372396 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
KDM4A-201ENST00000372396 DIAPH3Q9NSV4 1193 aa12.12□□□□□ -0.47
KDM4A-201ENST00000372396 FLIIQ13045 1269 aa12.12□□□□□ -0.47
KDM4A-201ENST00000372396 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
KDM4A-201ENST00000372396 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
KDM4A-201ENST00000372396 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
KDM4A-201ENST00000372396 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
KDM4A-201ENST00000372396 LRRCC1Q9C099 1032 aa12.11□□□□□ -0.47
KDM4A-201ENST00000372396 TSPYL1Q9H0U9 437 aa12.11□□□□□ -0.47
KDM4A-201ENST00000372396 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
KDM4A-201ENST00000372396 ORAI2Q96SN7 254 aa12.11□□□□□ -0.47
KDM4A-201ENST00000372396 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
KDM4A-201ENST00000372396 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
KDM4A-201ENST00000372396 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
KDM4A-201ENST00000372396 IGHDP01880 384 aa12.1□□□□□ -0.47
KDM4A-201ENST00000372396 HYPKQ9NX55 129 aa12.1□□□□□ -0.47
KDM4A-201ENST00000372396 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
KDM4A-201ENST00000372396 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
KDM4A-201ENST00000372396 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
KDM4A-201ENST00000372396 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
KDM4A-201ENST00000372396 CHL1O00533 1208 aa12.09□□□□□ -0.47
KDM4A-201ENST00000372396 DNAAF4Q8WXU2 420 aa12.09□□□□□ -0.47
KDM4A-201ENST00000372396 RTL1A6NKG5 1358 aa12.08□□□□□ -0.47
KDM4A-201ENST00000372396 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
KDM4A-201ENST00000372396 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 TECPR2O15040 1411 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 FAM193AP78312 1265 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
KDM4A-201ENST00000372396 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 RLBP1P12271 317 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 TIGD1Q96MW7 591 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
KDM4A-201ENST00000372396 CHRNA2Q15822 529 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 MEX3CQ5U5Q3 659 aaKnown RBP12.07□□□□□ -0.48
KDM4A-201ENST00000372396 CERS3Q8IU89 383 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 CNTROBQ8N137 903 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 MYO3AQ8NEV4 1616 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 MYL6BP14649 208 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
KDM4A-201ENST00000372396 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
KDM4A-201ENST00000372396 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 F6X3S4 739 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
KDM4A-201ENST00000372396 SRGAP3O43295 1099 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 RAB11FIP3O75154 756 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
KDM4A-201ENST00000372396 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
KDM4A-201ENST00000372396 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms