RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ERCC4Q92889 916 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF1-201ENST00000372189 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
RAPGEF1-201ENST00000372189 RBM25P49756 843 aaKnown RBP15.74■□□□□ 0.11
RAPGEF1-201ENST00000372189 TTC21AQ8NDW8 1320 aa15.74■□□□□ 0.11
RAPGEF1-201ENST00000372189 CCP110O43303 1012 aa15.74■□□□□ 0.11
RAPGEF1-201ENST00000372189 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
RAPGEF1-201ENST00000372189 MAP4K4O95819 1239 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 ZSCAN29Q8IWY8 852 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 METTL24Q5JXM2 366 aa15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 TEX13AQ9BXU3 409 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 GRPEL1Q9HAV7 217 aa15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 FAM193AP78312 1265 aa15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 SLFN5Q08AF3 891 aa15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 LRP2BPQ9P2M1 347 aa15.73■□□□□ 0.11
RAPGEF1-201ENST00000372189 HSPA2P54652 639 aa15.72■□□□□ 0.11
RAPGEF1-201ENST00000372189 ZMYM3Q14202 1370 aa15.72■□□□□ 0.11
RAPGEF1-201ENST00000372189 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
RAPGEF1-201ENST00000372189 NUP160Q12769 1436 aa15.72■□□□□ 0.11
RAPGEF1-201ENST00000372189 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF1-201ENST00000372189 AKAP2Q9Y2D5 859 aa15.72■□□□□ 0.11
RAPGEF1-201ENST00000372189 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 RBM10P98175 930 aaKnown RBP15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 RPGRQ92834 1020 aaKnown RBP15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 SDF4Q9BRK5 362 aa15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 TRMT112Q9UI30 125 aaKnown RBP15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.11
RAPGEF1-201ENST00000372189 CAVIN4Q5BKX8 364 aa15.71■□□□□ 0.1
RAPGEF1-201ENST00000372189 ANKIB1Q9P2G1 1089 aa15.71■□□□□ 0.1
RAPGEF1-201ENST00000372189 NEK4P51957 841 aa15.7■□□□□ 0.1
RAPGEF1-201ENST00000372189 CCDC69A6NI79 296 aa15.7■□□□□ 0.1
RAPGEF1-201ENST00000372189 PDILTQ8N807 584 aa15.7■□□□□ 0.1
RAPGEF1-201ENST00000372189 PDCP20941 246 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 DISP3Q9P2K9 1392 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 TDO2P48775 406 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 ZRSR2Q15696 482 aaKnown RBP15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 C8orf37Q96NL8 207 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 ALDH1L2Q3SY69 923 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 CHD1LQ86WJ1 897 aa15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 DBF4Q9UBU7 674 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-201ENST00000372189 IFIT1P09914 478 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 K7ELQ4 463 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 IL1RAPL2Q9NP60 686 aa15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 CCDC184Q52MB2 194 aa15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 KINO60870 393 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 IDH1O75874 414 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-201ENST00000372189 A0A087WZG4 1122 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 RBM28Q9NW13 759 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 CTNNA3Q9UI47 895 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 C11orf95C9JLR9 678 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 CIZ1Q9ULV3 898 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 GOLGA6L10A0A0M3HER8 536 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 GOLGA6L10A6NI86 522 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 ABCF2Q9UG63 623 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 LMTK3Q96Q04 1460 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 SMC2O95347 1197 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 ANKRD1Q15327 319 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 CDK5RAP3Q96JB5 506 aa15.67■□□□□ 0.1
RAPGEF1-201ENST00000372189 DNAAF4Q8WXU2 420 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 CAGE1Q8TC20 777 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 ATP10AO60312 1499 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 RAB11FIP3O75154 756 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 DHX37Q8IY37 1157 aaKnown RBP15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 TRIM22Q8IYM9 498 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 RFC4P35249 363 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 LEKR1Q6ZMV7 388 aa15.66■□□□□ 0.1
RAPGEF1-201ENST00000372189 ATP2B1P20020 1258 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 AIDAQ96BJ3 306 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 ANKRD18BA2A2Z9 1011 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 DZIP1Q86YF9 867 aaKnown RBP15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 UQCRHLA0A096LP55 91 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 UQCRHP07919 91 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 KIF1BPQ96EK5 621 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 MCM4P33991 863 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 TMEM132AQ24JP5 1023 aa15.65■□□□□ 0.1
RAPGEF1-201ENST00000372189 ZNF396Q96N95 335 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 ZBTB3Q9H5J0 574 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 ESPNB1AK53 854 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 GPTP24298 496 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 UBAC1Q9BSL1 405 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 SLC5A1P13866 664 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
RAPGEF1-201ENST00000372189 FIBPO43427 364 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms