RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
SSR4-202ENST00000370085 ADAMTS7Q9UKP4 1686 aa18.11■□□□□ 0.49
SSR4-202ENST00000370085 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
SSR4-202ENST00000370085 MRC1P22897 1456 aa18.1■□□□□ 0.49
SSR4-202ENST00000370085 TMPOP42166 694 aaKnown RBP18.1■□□□□ 0.49
SSR4-202ENST00000370085 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
SSR4-202ENST00000370085 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
SSR4-202ENST00000370085 RREB1Q92766 1687 aa18.09■□□□□ 0.49
SSR4-202ENST00000370085 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.49
SSR4-202ENST00000370085 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
SSR4-202ENST00000370085 MCM10Q7L590 875 aa18.08■□□□□ 0.48
SSR4-202ENST00000370085 TTC5Q8N0Z6 440 aa18.08■□□□□ 0.48
SSR4-202ENST00000370085 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
SSR4-202ENST00000370085 LY75O60449 1722 aa18.08■□□□□ 0.48
SSR4-202ENST00000370085 ATG3Q9NT62 314 aa18.07■□□□□ 0.48
SSR4-202ENST00000370085 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
SSR4-202ENST00000370085 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
SSR4-202ENST00000370085 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
SSR4-202ENST00000370085 APAF1O14727 1248 aa18.05■□□□□ 0.48
SSR4-202ENST00000370085 SIK1P57059 783 aa18.05■□□□□ 0.48
SSR4-202ENST00000370085 CALD1Q05682 793 aaKnown RBP18.05■□□□□ 0.48
SSR4-202ENST00000370085 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
SSR4-202ENST00000370085 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
SSR4-202ENST00000370085 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
SSR4-202ENST00000370085 NUP188Q5SRE5 1749 aa18.05■□□□□ 0.48
SSR4-202ENST00000370085 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
SSR4-202ENST00000370085 PROM2Q8N271 834 aa18.04■□□□□ 0.48
SSR4-202ENST00000370085 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
SSR4-202ENST00000370085 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
SSR4-202ENST00000370085 MIER1Q8N108 512 aa18.03■□□□□ 0.48
SSR4-202ENST00000370085 NGEFQ8N5V2 710 aa18.03■□□□□ 0.48
SSR4-202ENST00000370085 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
SSR4-202ENST00000370085 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.48
SSR4-202ENST00000370085 ZNF790Q6PG37 636 aa18.02■□□□□ 0.48
SSR4-202ENST00000370085 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
SSR4-202ENST00000370085 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
SSR4-202ENST00000370085 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
SSR4-202ENST00000370085 SLC39A6Q13433 755 aa18■□□□□ 0.47
SSR4-202ENST00000370085 FMNL2Q96PY5 1086 aa18■□□□□ 0.47
SSR4-202ENST00000370085 LRRC4BQ9NT99 713 aa18■□□□□ 0.47
SSR4-202ENST00000370085 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
SSR4-202ENST00000370085 C5P01031 1676 aa17.99■□□□□ 0.47
SSR4-202ENST00000370085 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
SSR4-202ENST00000370085 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
SSR4-202ENST00000370085 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
SSR4-202ENST00000370085 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
SSR4-202ENST00000370085 TRIM35Q9UPQ4 493 aa17.98■□□□□ 0.47
SSR4-202ENST00000370085 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
SSR4-202ENST00000370085 KCNQ4P56696 695 aa17.97■□□□□ 0.47
SSR4-202ENST00000370085 SLC15A2Q16348 729 aa17.97■□□□□ 0.47
SSR4-202ENST00000370085 AK7Q96M32 723 aa17.97■□□□□ 0.47
SSR4-202ENST00000370085 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
SSR4-202ENST00000370085 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
SSR4-202ENST00000370085 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
SSR4-202ENST00000370085 R3HDM1Q15032 1099 aaKnown RBP17.96■□□□□ 0.47
SSR4-202ENST00000370085 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
SSR4-202ENST00000370085 STARD3NLO95772 234 aa17.95■□□□□ 0.46
SSR4-202ENST00000370085 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
SSR4-202ENST00000370085 LAS1LQ9Y4W2 734 aaKnown RBP17.95■□□□□ 0.46
SSR4-202ENST00000370085 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
SSR4-202ENST00000370085 ZNF496Q96IT1 587 aaPredicted RBP17.94■□□□□ 0.46
SSR4-202ENST00000370085 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
SSR4-202ENST00000370085 C4BP0C0L5 1744 aa17.94■□□□□ 0.46
SSR4-202ENST00000370085 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
SSR4-202ENST00000370085 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
SSR4-202ENST00000370085 GNAI1P63096 354 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 ITPK1Q13572 414 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 RC3H1Q5TC82 1133 aaKnown RBP17.93■□□□□ 0.46
SSR4-202ENST00000370085 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 IFT57Q9NWB7 429 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 KDM3BQ7LBC6 1761 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 CNTNAP4Q9C0A0 1308 aa17.93■□□□□ 0.46
SSR4-202ENST00000370085 PSDA5PKW4 1024 aaPredicted RBP17.92■□□□□ 0.46
SSR4-202ENST00000370085 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
SSR4-202ENST00000370085 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
SSR4-202ENST00000370085 SLC4A9Q96Q91 983 aa17.92■□□□□ 0.46
SSR4-202ENST00000370085 COL5A3P25940 1745 aaPredicted RBP17.92■□□□□ 0.46
SSR4-202ENST00000370085 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
SSR4-202ENST00000370085 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
SSR4-202ENST00000370085 DNAJC10Q8IXB1 793 aa17.91■□□□□ 0.46
SSR4-202ENST00000370085 RTCBQ9Y3I0 505 aaKnown RBP17.91■□□□□ 0.46
SSR4-202ENST00000370085 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
SSR4-202ENST00000370085 QSER1Q2KHR3 1735 aa17.91■□□□□ 0.46
SSR4-202ENST00000370085 TJP1Q07157 1748 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 CHL1O00533 1208 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 GNPATO15228 680 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 KCNQ3O43525 872 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 SSFA2P28290 1259 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
SSR4-202ENST00000370085 WDR63Q8IWG1 891 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 IL16Q14005 1332 aa17.9■□□□□ 0.46
SSR4-202ENST00000370085 MSH5O43196 834 aa17.89■□□□□ 0.45
SSR4-202ENST00000370085 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
SSR4-202ENST00000370085 CCDC87Q9NVE4 849 aa17.89■□□□□ 0.45
SSR4-202ENST00000370085 CYP19A1P11511 503 aaPredicted RBP17.88■□□□□ 0.45
SSR4-202ENST00000370085 ADRA2BP18089 450 aa17.88■□□□□ 0.45
SSR4-202ENST00000370085 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
SSR4-202ENST00000370085 SENP3-EIF4A1A0A087X0R7 540 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms